Index

_

__add__() (molmass.Formula method) __bool__() (tifffile.COMPRESSION method) (tifffile.PREDICTOR method) (tifffile.RESUNIT method) (tifffile.TiffPages method) (tifffile.TiffSeries method) __call__() (czifile.CziImage method) (czifile.CziScenes method) (liffile.LifImageFrames method) (tifffile.TiffSeries method) __contains__() (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) __delitem__() (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) __eq__() (roifile.ImagejRoi method) (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) __getattr__() (tifffile.TiffFile method) __getitem__() (czifile.CziScenes method) (lfdfiles.GlobalsAscii method) (lfdfiles.GlobalsLif method) (lfdfiles.SimfcsJrn method) (lfdfiles.VistaIfi method) (liffile.LifImageFrames method) (liffile.LifImageSeries method) (liffile.LifTileScanInfo method) (obffile.ObfStackSequence method) (tifffile.TiffPageSeries method) (tifffile.TiffSeries method) (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) __hash__() (roifile.ImagejRoi method) (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) __init__() (ptufile.PtuWriter method) __iter__() (czifile.CziImageChunks method) (czifile.CziScenes method) (lfdfiles.GlobalsLif method) (lfdfiles.LfdFileSequence method) (lfdfiles.SimfcsGpSeries method) (lfdfiles.SimfcsJrn method) (liffile.LifImageFrames method) (tifffile.FileSequence method) (tifffile.TiffPageSeries method) (tifffile.TiffSequence method) (tifffile.TiffSeries method) (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) __len__() (czifile.CziImageChunks method) (czifile.CziScenes method) (lfdfiles.GlobalsLif method) (lfdfiles.SimfcsJrn method) (liffile.LifImageFrames method) (liffile.LifTileScanInfo method) (tifffile.FileCache method) (tifffile.TiffPages method) (tifffile.TiffPageSeries method) (tifffile.TiffSeries method) (tifffile.TiffTagRegistry method) (tifffile.TiffTags method)

__mul__() (molmass.Formula method) __new__() (lfdfiles.BioradPic static method) (lfdfiles.Ccp4Map static method) (lfdfiles.FlieOut static method) (lfdfiles.FliezDb2 static method) (lfdfiles.FliezI16 static method) (lfdfiles.FlimageBin static method) (lfdfiles.FlimfastFlif static method) (lfdfiles.GlobalsAscii static method) (lfdfiles.GlobalsLif static method) (lfdfiles.LfdFile static method) (lfdfiles.RawPal static method) (lfdfiles.SimfcsB64 static method) (lfdfiles.SimfcsBh static method) (lfdfiles.SimfcsBhz static method) (lfdfiles.SimfcsBin static method) (lfdfiles.SimfcsCyl static method) (lfdfiles.SimfcsFit static method) (lfdfiles.SimfcsI64 static method) (lfdfiles.SimfcsInt static method) (lfdfiles.SimfcsIntPhsMod static method) (lfdfiles.SimfcsJrn static method) (lfdfiles.SimfcsR64 static method) (lfdfiles.SimfcsRef static method) (lfdfiles.SimfcsVpl static method) (lfdfiles.SimfcsVpp static method) (lfdfiles.SimfcsZ64 static method) (lfdfiles.Vaa3dRaw static method) (lfdfiles.VistaIfi static method) (lfdfiles.VistaIfli static method) (lfdfiles.VistaTdflim static method) (lfdfiles.VoxxMap static method) __new_member__() (czifile.CziCompressionType method) (czifile.CziContentFileType method) (czifile.CziPixelType method) (czifile.CziSegmentId method) __rmul__() (molmass.Formula method) __setitem__() (tifffile.TiffTags method) __str__() (czifile.CziCompressionType method) (tifffile.OmeXml method) (tifffile.Timer method) __sub__() (molmass.Formula method) _TIFF (class in tifffile)

A

abundance (molmass.elements.Isotope attribute) (molmass.Isotope attribute) acquisition_time (ptufile.PtuFile property) active_channels (ptufile.PtuFile property) add() (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) addimage() (tifffile.OmeXml method) ADOBE_DEFLATE (tifffile.COMPRESSION attribute) AIVIA (liffile.LifMemoryBlockType attribute) ALLOCATIONGRANULARITY (tifffile._TIFF property) ALPHA (psdtags.PsdKey attribute) ALPHA_IDENTIFIERS (psdtags.PsdResourceId attribute) ALPHA_NAMES_PASCAL (psdtags.PsdResourceId attribute) ALPHA_NAMES_UNICODE (psdtags.PsdResourceId attribute) ALT_JPEG (tifffile.COMPRESSION attribute) ALTERNATE_DUOTONE_COLORS (psdtags.PsdResourceId attribute) ALTERNATE_SPOT_COLORS (psdtags.PsdResourceId attribute) analyze() (in module molmass) andor_metadata (tifffile.TiffFile property) andor_tags (tifffile.TiffPage property) ANGLE (roifile.ROI_TYPE attribute) ANIMATION_EFFECTS (psdtags.PsdKey attribute) ANNOTATION (oirfile.METADATA attribute) ANNOTATIONS (psdtags.PsdKey attribute) APERIO_JP2000_RGB (tifffile.COMPRESSION attribute) APERIO_JP2000_YCBC (tifffile.COMPRESSION attribute) APPLIED (psdtags.PsdLayerMaskFlag attribute) ARROW (roifile.ROI_SUBTYPE attribute) ARTBOARD_DATA (psdtags.PsdKey attribute) ARTBOARD_DATA_2 (psdtags.PsdKey attribute) ARTBOARD_DATA_3 (psdtags.PsdKey attribute) asarray() (czifile.CziFile method) (czifile.CziImage method) (lfdfiles.BioradPic method) (lfdfiles.Ccp4Map method) (lfdfiles.FlieOut method) (lfdfiles.FliezDb2 method) (lfdfiles.FliezI16 method) (lfdfiles.FlimageBin method) (lfdfiles.FlimfastFlif method) (lfdfiles.GlobalsAscii method) (lfdfiles.GlobalsLif method) (lfdfiles.GlobalsLif.Record method) (lfdfiles.LfdFile method) (lfdfiles.LfdFileSequence method) (lfdfiles.RawPal method) (lfdfiles.SimfcsB64 method) (lfdfiles.SimfcsBh method) (lfdfiles.SimfcsBhz method) (lfdfiles.SimfcsBin method) (lfdfiles.SimfcsCyl method) (lfdfiles.SimfcsFit method) (lfdfiles.SimfcsGpSeries method) (lfdfiles.SimfcsI64 method) (lfdfiles.SimfcsInt method) (lfdfiles.SimfcsIntPhsMod method) (lfdfiles.SimfcsJrn method) (lfdfiles.SimfcsR64 method) (lfdfiles.SimfcsRef method) (lfdfiles.SimfcsVpl method) (lfdfiles.SimfcsVpp method) (lfdfiles.SimfcsZ64 method) (lfdfiles.Vaa3dRaw method) (lfdfiles.VistaIfi method) (lfdfiles.VistaIfli method) (lfdfiles.VistaTdflim method) (lfdfiles.VoxxMap method) (liffile.LifFlimImage method) (liffile.LifImage method) (liffile.LifImageABC method) (liffile.LifImageFrames method) (netpbmfile.NetpbmFile method) (obffile.ObfStack method) (oiffile.OifFile method) (oirfile.OirFile method) (oirfile.OirReference method) (psdtags.PsdLayer method) (psdtags.PsdPatterns method) (tifffile.FileSequence method) (tifffile.TiffFile method) (tifffile.TiffFrame method) (tifffile.TiffPage method) (tifffile.TiffPageSeries method) (tifffile.TiffSequence method) ascii (sdtfile.SetupBlock attribute) ASCII (tifffile.DATATYPE attribute) asdict() (molmass.Composition method) (molmass.Spectrum method) asimage() (czifile.CziDirectoryEntryDV method) (fbdfile.FbdFile method) askopenfilename() (in module tifffile) aspage() (tifffile.TiffFrame method) (tifffile.TiffPage method) ASSOCALPHA (tifffile.EXTRASAMPLE attribute) astrotiff_metadata (tifffile.TiffFile property) astuple() (molmass.Composition method) (molmass.CompositionItem method) (molmass.Spectrum method) (molmass.SpectrumEntry method) (tifffile.TiffTag method)

astype() (in module tifffile) asxarray() (czifile.CziFile method) (czifile.CziImage method) (liffile.LifFlimImage method) (liffile.LifImage method) (liffile.LifImageABC method) (liffile.LifImageFrames method) (obffile.ObfStack method) (oirfile.OirFile method) (oirfile.OirReference method) (tifffile.TiffFile method) (tifffile.TiffFrame method) (tifffile.TiffPage method) (tifffile.TiffPageSeries method) aszarr() (lfdfiles.LfdFileSequence method) (lfdfiles.SimfcsGpSeries method) (tifffile.FileSequence method) (tifffile.TiffFile method) (tifffile.TiffFrame method) (tifffile.TiffPage method) (tifffile.TiffPageSeries method) (tifffile.TiffSequence method) atmrad (molmass.Element attribute) (molmass.elements.Element attribute) atoms (molmass.Formula property) attachment_directory (czifile.CziFile property) attachments() (czifile.CziFile method) (czifile.CziSubBlockSegmentData method) attrs (czifile.CziFile property) (czifile.CziImage property) (fbdfile.FbdFile property) (lfdfiles.VistaTdflim attribute) (liffile.LifFile property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (obffile.ObfFile property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) AUTO_SAVE_FILE_PATH (psdtags.PsdResourceId attribute) AUTO_SAVE_FORMAT (psdtags.PsdResourceId attribute) autoname (roifile.ImagejRoi property) avs_metadata (tifffile.TiffFile property) axes (czifile.CziImage property) (lfdfiles.BioradPic attribute) (lfdfiles.Ccp4Map attribute) (lfdfiles.FlieOut attribute) (lfdfiles.FliezDb2 attribute) (lfdfiles.FliezI16 attribute) (lfdfiles.FlimageBin attribute) (lfdfiles.FlimfastFlif attribute) (lfdfiles.GlobalsAscii attribute) (lfdfiles.GlobalsLif attribute) (lfdfiles.LfdFile attribute) (lfdfiles.LfdFileSequence attribute) (lfdfiles.RawPal attribute) (lfdfiles.SimfcsB64 attribute) (lfdfiles.SimfcsBh attribute) (lfdfiles.SimfcsBhz attribute) (lfdfiles.SimfcsBin attribute) (lfdfiles.SimfcsCyl attribute) (lfdfiles.SimfcsFit attribute) (lfdfiles.SimfcsGpSeries attribute) (lfdfiles.SimfcsI64 attribute) (lfdfiles.SimfcsInt attribute) (lfdfiles.SimfcsIntPhsMod attribute) (lfdfiles.SimfcsJrn attribute) (lfdfiles.SimfcsR64 attribute) (lfdfiles.SimfcsRef attribute) (lfdfiles.SimfcsVpl attribute) (lfdfiles.SimfcsVpp attribute) (lfdfiles.SimfcsZ64 attribute) (lfdfiles.Vaa3dRaw attribute) (lfdfiles.VistaIfi attribute) (lfdfiles.VistaIfli attribute) (lfdfiles.VistaTdflim attribute) (lfdfiles.VoxxMap attribute) (netpbmfile.NetpbmFile property) (oiffile.OifFile property) (tifffile.FileSequence attribute) (tifffile.TiffFrame property) (tifffile.TiffPage attribute) (tifffile.TiffPageSeries property) (tifffile.TiffSequence attribute) AXES_CODES (tifffile._TIFF property) AXES_NAMES (tifffile._TIFF property)

B

BACKGROUND_COLOR (psdtags.PsdResourceId attribute) BASE (psdtags.PsdClippingType attribute) (psdtags.PsdLayerFlag attribute) (psdtags.PsdLayerMaskFlag attribute) (psdtags.PsdLayerMaskParameterFlag attribute) bbox (czifile.CziImage property) BE32BIT (psdtags.PsdFormat attribute) BE64BIT (psdtags.PsdFormat attribute) BGR192COMPLEXFLOAT (czifile.CziPixelType attribute) BGR24 (czifile.CziPixelType attribute) BGR48 (czifile.CziPixelType attribute) BGR96FLOAT (czifile.CziPixelType attribute) BGRA32 (czifile.CziPixelType attribute) bh_bin_hdr (sdtfile.SetupBlock attribute) bif_metadata (tifffile.TiffFile property) BIG_BE (tifffile._TIFF property) BIG_LE (tifffile._TIFF property) BINARY (czifile.CziContentFileType attribute) binary (sdtfile.SetupBlock attribute) binread() (in module ptufile) binwrite() (in module ptufile) BioradPic (class in lfdfiles) bioradpic_write() (in module lfdfiles) Bitmap (psdtags.PsdImageMode attribute) bitspersample (oirfile.OirFile property) BLACK_AND_WHITE (psdtags.PsdKey attribute)

BLEACH_START (czifile.CziEventType attribute) BLEACH_STOP (czifile.CziEventType attribute) BLEND_CLIPPING_ELEMENTS (psdtags.PsdKey attribute) BLEND_INTERIOR_ELEMENTS (psdtags.PsdKey attribute) blendmode (psdtags.PsdLayer attribute) BLOCK (czifile.CziDimensionType attribute) block (molmass.Element attribute) (molmass.elements.Element attribute) block_headers (sdtfile.SdtFile attribute) block_measure_info() (sdtfile.SdtFile method) BlockNo (class in sdtfile) blocks (psdtags.TiffImageResources attribute) blocks_dict (psdtags.TiffImageResources property) BlockType (class in sdtfile) BLUE (psdtags.PsdColorType attribute) BMP (liffile.LifMemoryBlockType attribute) BORDER_INFO (psdtags.PsdResourceId attribute) BOTLEFT (tifffile.ORIENTATION attribute) BOTRIGHT (tifffile.ORIENTATION attribute) BOUNDING_SECTION_DIVIDER (psdtags.PsdSectionDividerType attribute) BRIGHTNESS_AND_CONTRAST (psdtags.PsdKey attribute) BYTE (tifffile.DATATYPE attribute) byteorder (netpbmfile.NetpbmFile attribute) (oiffile.CompoundFile attribute) (psdtags.PsdFormat property) (psdtags.TiffImageSourceData property) (tifffile.TiffFile property)

C

c2pa_metadata (tifffile.TiffFile property) cache (tifffile.TiffPages property) cache_records (ptufile.PtuFile property) CAI (psdtags.PsdKey attribute) CAMERAIMAGE (oirfile.METADATA attribute) CAMERARAW (czifile.CziCompressionType attribute) CAPTION_DIGEST (psdtags.PsdResourceId attribute) CAPTION_PASCAL (psdtags.PsdResourceId attribute) CCIRLEW (tifffile.COMPRESSION attribute) CCITT_T4 (tifffile.COMPRESSION attribute) CCITT_T6 (tifffile.COMPRESSION attribute) CCITTFAX3 (tifffile.COMPRESSION attribute) CCITTFAX4 (tifffile.COMPRESSION attribute) CCITTRLE (tifffile.COMPRESSION attribute) Ccp4Map (class in lfdfiles) ccp4map_write() (in module lfdfiles) cell_angle (lfdfiles.Ccp4Map attribute) cell_interval (lfdfiles.Ccp4Map attribute) cell_length (lfdfiles.Ccp4Map attribute) CENTIMETER (tifffile.RESUNIT attribute) CFA (tifffile.PHOTOMETRIC attribute) CHANNEL (czifile.CziDimensionType attribute) CHANNEL0 (psdtags.PsdChannelId attribute) CHANNEL1 (psdtags.PsdChannelId attribute) CHANNEL2 (psdtags.PsdChannelId attribute) CHANNEL3 (psdtags.PsdChannelId attribute) CHANNEL4 (psdtags.PsdChannelId attribute) CHANNEL5 (psdtags.PsdChannelId attribute) CHANNEL6 (psdtags.PsdChannelId attribute) CHANNEL7 (psdtags.PsdChannelId attribute) CHANNEL8 (psdtags.PsdChannelId attribute) CHANNEL9 (psdtags.PsdChannelId attribute) CHANNEL_BLENDING_RESTRICTIONS_SETTING (psdtags.PsdKey attribute) channel_indices (lfdfiles.VistaIfi property) (lfdfiles.VistaIfli property) CHANNEL_MIXER (psdtags.PsdKey attribute) channelid (psdtags.PsdChannel attribute) channels (czifile.CziImage property) (fbdfile.FbdFile attribute) (oirfile.OirFile property) (psdtags.PsdLayer attribute) (psdtags.PsdVirtualMemoryArrayList attribute) charge (molmass.elements.Particle attribute) (molmass.Formula property) (molmass.Particle attribute) child_images (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) children (liffile.LifFile property) chunked (tifffile.TiffFrame property) (tifffile.TiffPage property) CHUNKMODE (class in tifffile) chunks (tifffile.TiffFrame property) (tifffile.TiffPage property) chunks() (czifile.CziImage method) (in module dnacurve) CIELAB (tifffile.PHOTOMETRIC attribute) CIRCLE (roifile.ROI_POINT_TYPE attribute) CLASSIC_BE (tifffile._TIFF property) CLASSIC_LE (tifffile._TIFF property) clear() (tifffile.FileCache method) clipping (psdtags.PsdLayer attribute) CLIPPING_PATH_NAME (psdtags.PsdResourceId attribute) clock() (tifffile.Timer static method) close() (czifile.CziFile method) (fbdfile.FbdFile method) (lfdfiles.BioradPic method) (lfdfiles.Ccp4Map method) (lfdfiles.FlieOut method) (lfdfiles.FliezDb2 method) (lfdfiles.FliezI16 method) (lfdfiles.FlimageBin method) (lfdfiles.FlimfastFlif method) (lfdfiles.GlobalsAscii method) (lfdfiles.GlobalsLif method) (lfdfiles.LfdFile method) (lfdfiles.LfdFileSequence method) (lfdfiles.RawPal method) (lfdfiles.SimfcsB64 method) (lfdfiles.SimfcsBh method) (lfdfiles.SimfcsBhz method) (lfdfiles.SimfcsBin method) (lfdfiles.SimfcsCyl method) (lfdfiles.SimfcsFit method) (lfdfiles.SimfcsGpSeries method) (lfdfiles.SimfcsI64 method) (lfdfiles.SimfcsInt method) (lfdfiles.SimfcsIntPhsMod method) (lfdfiles.SimfcsJrn method) (lfdfiles.SimfcsR64 method) (lfdfiles.SimfcsRef method) (lfdfiles.SimfcsVpl method) (lfdfiles.SimfcsVpp method) (lfdfiles.SimfcsZ64 method) (lfdfiles.Vaa3dRaw method) (lfdfiles.VistaIfi method) (lfdfiles.VistaIfli method) (lfdfiles.VistaTdflim method) (lfdfiles.VoxxMap method) (liffile.LifFile method) (netpbmfile.NetpbmFile method) (obffile.ObfFile method) (oiffile.CompoundFile method) (oiffile.FileSystemAbc method) (oiffile.OibFileSystem method) (oiffile.OifFile method) (oiffile.OifFileSystem method) (oirfile.OirFile method) (oirfile.PoirFile method) (ptufile.PhuFile method) (ptufile.PqFile method) (ptufile.PtuFile method) (ptufile.PtuWriter method) (sdtfile.SdtFile method) (tifffile.FileCache method) (tifffile.FileHandle method) (tifffile.FileSequence method) (tifffile.TiffFile method) (tifffile.TiffSequence method) (tifffile.TiffWriter method) (tifffile.zarr.ZarrTiffStore method) closed (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (oirfile.PoirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.FileHandle property) CLOSED_FOLDER (psdtags.PsdSectionDividerType attribute) clsid (oiffile.CompoundFile attribute) CMYK (psdtags.PsdColorSpaceType attribute) (psdtags.PsdImageMode attribute) code (fbdfile.FbdFile attribute) COINCIDENCE_FILTERING (ptufile.PtuHwFeatures attribute) COLOR (psdtags.PsdBlendMode attribute) color (psdtags.PsdSheetColorSetting attribute) COLOR_BALANCE (psdtags.PsdKey attribute) COLOR_BURN (psdtags.PsdBlendMode attribute) COLOR_DODGE (psdtags.PsdBlendMode attribute) COLOR_HALFTONING_INFO (psdtags.PsdResourceId attribute) COLOR_LOOKUP (psdtags.PsdKey attribute) COLOR_SAMPLERS_RESOURCE (psdtags.PsdResourceId attribute) COLOR_SAMPLERS_RESOURCE_OBSOLETE (psdtags.PsdResourceId attribute) COLOR_TRANSFER_FUNCTION (psdtags.PsdResourceId attribute) colormap (tifffile.TiffPage property) colorspace (psdtags.PsdColorBlock attribute) (psdtags.PsdFilterMask attribute) (psdtags.PsdUserMask attribute) colortype (oirfile.OirFile property)

com (oiffile.OibFileSystem attribute) comment (dnacurve.Sequence attribute) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) commonpath() (lfdfiles.LfdFileSequence method) (lfdfiles.SimfcsGpSeries method) (tifffile.FileSequence method) (tifffile.TiffSequence method) companion_files (oirfile.OirFile property) complementary() (in module dnacurve) COMPLEX (tifffile.DATATYPE attribute) COMPLEXIEEEFP (tifffile.SAMPLEFORMAT attribute) COMPLEXINT (tifffile.SAMPLEFORMAT attribute) components (lfdfiles.BioradPic attribute) (lfdfiles.Ccp4Map attribute) (lfdfiles.FlieOut attribute) (lfdfiles.FliezDb2 attribute) (lfdfiles.FliezI16 attribute) (lfdfiles.FlimageBin attribute) (lfdfiles.FlimfastFlif attribute) (lfdfiles.GlobalsAscii attribute) (lfdfiles.GlobalsLif attribute) (lfdfiles.LfdFile attribute) (lfdfiles.RawPal attribute) (lfdfiles.SimfcsB64 attribute) (lfdfiles.SimfcsBh attribute) (lfdfiles.SimfcsBhz attribute) (lfdfiles.SimfcsBin attribute) (lfdfiles.SimfcsCyl attribute) (lfdfiles.SimfcsFit attribute) (lfdfiles.SimfcsI64 attribute) (lfdfiles.SimfcsInt attribute) (lfdfiles.SimfcsIntPhsMod attribute) (lfdfiles.SimfcsJrn attribute) (lfdfiles.SimfcsR64 attribute) (lfdfiles.SimfcsRef attribute) (lfdfiles.SimfcsVpl attribute) (lfdfiles.SimfcsVpp attribute) (lfdfiles.SimfcsZ64 attribute) (lfdfiles.Vaa3dRaw attribute) (lfdfiles.VistaIfi attribute) (lfdfiles.VistaIfli attribute) (lfdfiles.VistaTdflim attribute) (lfdfiles.VoxxMap attribute) composite (roifile.ImagejRoi property) Composition (class in molmass) composition() (molmass.Formula method) CompositionItem (class in molmass) COMPOSITOR_USED (psdtags.PsdKey attribute) CompoundFile (class in oiffile) compress() (in module psdtags) COMPRESSION (class in tifffile) compression (czifile.CziImage property) (oiffile.OibFileSystem attribute) (psdtags.PsdChannel attribute) (psdtags.PsdVirtualMemoryArray attribute) (tifffile.TiffFrame property) COMPRESSORS (tifffile._TIFF property) compute_encoded_size() (tifffile.zarr.Tiff method) CONTENT_GENERATOR_EXTRA_DATA (psdtags.PsdKey attribute) CONTI (ptufile.PhuMeasurementMode attribute) CONTIG (tifffile.PLANARCONFIG attribute) convert2tiff() (in module lfdfiles) coord_offsets (czifile.CziImage property) (oirfile.OirFile property) (oirfile.OirReference property) (tifffile.TiffPageSeries property) coord_scales (czifile.CziImage property) (oirfile.OirFile property) (oirfile.OirReference property) (tifffile.TiffPageSeries property) coord_units (czifile.CziImage property) (oirfile.OirFile property) (oirfile.OirReference property) (tifffile.TiffPageSeries property) coordinates (dnacurve.CurvedDNA attribute) coordinates() (roifile.ImagejRoi method) coords (czifile.CziImage property) (lfdfiles.VistaTdflim attribute) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PtuFile property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) COPYRIGHT_FLAG (psdtags.PsdResourceId attribute) count (molmass.CompositionItem attribute) COUNT_INFO (psdtags.PsdResourceId attribute) covrad (molmass.Element attribute) (molmass.elements.Element attribute) create_output() (in module tifffile) CROSS (roifile.ROI_POINT_TYPE attribute) csv() (dnacurve.CurvedDNA method) curvature (dnacurve.CurvedDNA attribute) CurvedDNA (class in dnacurve) CURVES (psdtags.PsdKey attribute) CZ_LSM_LUTTYPE (tifffile._TIFF property) CZ_LSM_SUBBLOCK_TYPE (tifffile._TIFF property) CZ_LSMINFO (tifffile._TIFF property) CZ_LSMINFO_DATATYPES (tifffile._TIFF property) CZ_LSMINFO_DIMENSIONS (tifffile._TIFF property) CZ_LSMINFO_READERS (tifffile._TIFF property) CZ_LSMINFO_SCANINFO_ARRAYS (tifffile._TIFF property) CZ_LSMINFO_SCANINFO_ATTRIBUTES (tifffile._TIFF property) CZ_LSMINFO_SCANINFO_STRUCTS (tifffile._TIFF property) CZ_LSMINFO_SCANTYPE (tifffile._TIFF property) CZ_LSMINFO_TYPEOFDATA (tifffile._TIFF property) CZEVL (czifile.CziContentFileType attribute) CZEXP (czifile.CziContentFileType attribute) CZFBMX (czifile.CziContentFileType attribute) CZFOC (czifile.CziContentFileType attribute) CZHWS (czifile.CziContentFileType attribute) CZI (czifile.CziContentFileType attribute) CziAttachmentDirectorySegmentData (class in czifile) CziAttachmentEntryA1 (class in czifile) CziAttachmentSegmentData (class in czifile) CziCompressionType (class in czifile) CziContentFileType (class in czifile) CziDeletedSegmentData (class in czifile) CziDimensionEntryDV1 (class in czifile) CziDimensionType (class in czifile) CziDirectoryEntryDV (class in czifile) CziEventListEntry (class in czifile) CziEventType (class in czifile) CziFile (class in czifile) czifile (czifile.CziSegment property) czifile.__version__ (in module czifile) czifile.CONVERT_PIXELTYPE (in module czifile) CziFileError (class in czifile) CziFileHeaderSegmentData (class in czifile) CziImage (class in czifile) CziImageChunks (class in czifile) CziMetadataSegmentData (class in czifile) CziPixelType (class in czifile) CziPyramidType (class in czifile) CziScenes (class in czifile) CziSegment (class in czifile) CziSegmentData (class in czifile) CziSegmentId (class in czifile) CziSegmentNotFoundError (class in czifile) CziSubBlockDirectorySegmentData (class in czifile) CziSubBlockSegmentData (class in czifile) CziUnknownSegmentData (class in czifile) CZLUT (czifile.CziContentFileType attribute) CZMVM (czifile.CziContentFileType attribute) CZPML (czifile.CziContentFileType attribute) CZTIMS (czifile.CziContentFileType attribute)

D

DARKEN (psdtags.PsdBlendMode attribute) DARKER_COLOR (psdtags.PsdBlendMode attribute) data (psdtags.PsdPatterns attribute) (psdtags.PsdTextEngineData attribute) (psdtags.PsdThumbnailBlock property) (sdtfile.SdtFile attribute) data() (czifile.CziAttachmentSegmentData method) (czifile.CziMetadataSegmentData method) (czifile.CziSegment method) (czifile.CziSubBlockSegmentData method) DATA_CHECK_FAIL (ptufile.PtuStopReason attribute) DATA_DTYPES (tifffile._TIFF property) DATA_FORMATS (tifffile._TIFF property) data_offset (czifile.CziSegment property) DATA_XFER_FAIL (ptufile.PtuStopReason attribute) databytecounts (tifffile.TiffPage attribute) dataformat (tifffile.TiffTag property) dataframe() (molmass.Composition method) (molmass.Spectrum method) dataoffset (netpbmfile.NetpbmFile attribute) (tifffile.TiffPageSeries property) dataoffsets (tifffile.TiffPage attribute) DATATYPE (class in tifffile) date (dnacurve.CurvedDNA attribute) datetime (czifile.CziImage property) (liffile.LifFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (tifffile.TiffFrame property) (tifffile.TiffPage property) dc_ref() (lfdfiles.SimfcsFit method) DCS (tifffile.COMPRESSION attribute) decode (tifffile.TiffFrame property) (tifffile.TiffPage property) decode() (fbdfile.FbdFile method) (ptufile.numcodecs.Ptu method) (tifffile.numcodecs.Tiff method) decode_histogram() (ptufile.PtuFile method) decode_image() (ptufile.PtuFile method) decode_records() (ptufile.PtuFile method) decoder (fbdfile.FbdFile attribute) decoder() (czifile.CziCompressionType static method) decoder_settings (fbdfile.FbdFile property) decompress() (in module psdtags) DECOMPRESSORS (tifffile._TIFF property) DECTRIS_TAGS (tifffile._TIFF property) DEFLATE (tifffile.COMPRESSION attribute) delete() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) DELETED (czifile.CziSegmentId attribute) density (molmass.Element attribute) (molmass.elements.Element attribute) density_max (lfdfiles.Ccp4Map attribute) density_mean (lfdfiles.Ccp4Map attribute) density_min (lfdfiles.Ccp4Map attribute) density_rms (lfdfiles.Ccp4Map attribute) DEPTH (czifile.CziDimensionType attribute) depth (netpbmfile.NetpbmFile attribute) DEPTH_MAP (tifffile.PHOTOMETRIC attribute) description (molmass.Element property) (molmass.elements.Element property) DIC (psdtags.PsdColorSpaceType attribute) difat_len (oiffile.CompoundFile attribute) difat_start (oiffile.CompoundFile attribute) DIFFERENCE (psdtags.PsdBlendMode attribute) dilution() (in module molmass) dims (czifile.CziImage property) (lfdfiles.LfdFileSequence attribute) (lfdfiles.SimfcsGpSeries attribute) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PtuFile property) (tifffile.FileSequence attribute) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) (tifffile.TiffSequence attribute) dinuc_window() (in module dnacurve)

dinucleotide_matrix() (in module dnacurve) dir_len (oiffile.CompoundFile attribute) dir_start (oiffile.CompoundFile attribute) directory_entries (czifile.CziImage property) directory_entry_offset (czifile.CziSubBlockSegmentData property) direntry() (oiffile.CompoundFile method) dirname (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.FileHandle property) DISABLED (psdtags.PsdLayerMaskFlag attribute) DISPLAY_INFO (psdtags.PsdResourceId attribute) DISPLAY_INFO_OBSOLETE (psdtags.PsdResourceId attribute) DISSOLVE (psdtags.PsdBlendMode attribute) DIVIDE (psdtags.PsdBlendMode attribute) DIVIDER_GT_ONE (ptufile.PtuMeasurementWarnings attribute) DLL (ptufile.PtuHwFeatures attribute) dnacurve.__version__ (in module dnacurve) dnacurve.MAXLEN (in module dnacurve) dnacurve.MODELS (in module dnacurve) DNG (tifffile.FILETYPE attribute) DOT (roifile.ROI_POINT_TYPE attribute) DOUBLE (tifffile.DATATYPE attribute) DOUBLE_HEADED (roifile.ROI_OPTIONS attribute) DRAW_OFFSET (roifile.ROI_OPTIONS attribute) drawoffset (roifile.ImagejRoi property) dtype (czifile.CziDirectoryEntryDV property) (czifile.CziImage property) (czifile.CziPixelType attribute) (lfdfiles.BioradPic attribute) (lfdfiles.Ccp4Map attribute) (lfdfiles.FlieOut attribute) (lfdfiles.FliezDb2 attribute) (lfdfiles.FliezI16 attribute) (lfdfiles.FlimageBin attribute) (lfdfiles.FlimfastFlif attribute) (lfdfiles.GlobalsAscii attribute) (lfdfiles.GlobalsLif attribute) (lfdfiles.LfdFile attribute) (lfdfiles.RawPal attribute) (lfdfiles.SimfcsB64 attribute) (lfdfiles.SimfcsBh attribute) (lfdfiles.SimfcsBhz attribute) (lfdfiles.SimfcsBin attribute) (lfdfiles.SimfcsCyl attribute) (lfdfiles.SimfcsFit attribute) (lfdfiles.SimfcsI64 attribute) (lfdfiles.SimfcsInt attribute) (lfdfiles.SimfcsIntPhsMod attribute) (lfdfiles.SimfcsJrn attribute) (lfdfiles.SimfcsR64 attribute) (lfdfiles.SimfcsRef attribute) (lfdfiles.SimfcsVpl attribute) (lfdfiles.SimfcsVpp attribute) (lfdfiles.SimfcsZ64 attribute) (lfdfiles.Vaa3dRaw attribute) (lfdfiles.VistaIfi attribute) (lfdfiles.VistaIfli attribute) (lfdfiles.VistaTdflim attribute) (lfdfiles.VoxxMap attribute) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (netpbmfile.NetpbmFile attribute) (obffile.ObfStack property) (oiffile.OifFile property) (oirfile.OirFile property) (oirfile.OirReference property) (psdtags.PsdLayers property) (psdtags.PsdVirtualMemoryArray property) (ptufile.PtuFile property) (tifffile.TiffFrame property) (tifffile.TiffPage attribute) (tifffile.TiffPageSeries attribute) dtype_name (tifffile.TiffTag property) Duotone (psdtags.PsdColorSpaceType attribute) (psdtags.PsdImageMode attribute) DUOTONE_HALFTONING_INFO (psdtags.PsdResourceId attribute) DUOTONE_IMAGE_INFO (psdtags.PsdResourceId attribute) DUOTONE_TRANSFER_FUNCTION (psdtags.PsdResourceId attribute)

E

eer_metadata (tifffile.TiffFile property) eer_tags (tifffile.TiffPage property) EER_V0 (tifffile.COMPRESSION attribute) EER_V1 (tifffile.COMPRESSION attribute) EER_V2 (tifffile.COMPRESSION attribute) EFFECTIVE_BW (psdtags.PsdResourceId attribute) EFFECTS_LAYER (psdtags.PsdKey attribute) EFFECTS_VISIBLE (psdtags.PsdResourceId attribute) eleaffin (molmass.Element attribute) (molmass.elements.Element attribute) eleconfig (molmass.Element attribute) (molmass.elements.Element attribute) eleconfig_dict (molmass.Element property) (molmass.elements.Element property) ELECTRON (in module molmass) (in module molmass.elements) electrons (molmass.Element property) (molmass.elements.Element property) Element (class in molmass) (class in molmass.elements) ELEMENTS (in module molmass) (in module molmass.elements) eleneg (molmass.Element attribute) (molmass.elements.Element attribute) eleshells (molmass.Element property) (molmass.elements.Element property) ELLIPSE (roifile.ROI_SUBTYPE attribute)

empirical (molmass.Formula property) encode() (ptufile.numcodecs.Ptu method) (tifffile.numcodecs.Tiff method) ENHANCED (tifffile.FILETYPE attribute) enumarg() (in module tifffile) enumstr() (in module tifffile) epics_metadata (tifffile.TiffFile property) epics_tags (tifffile.TiffPage property) EPS_OPTIONS (psdtags.PsdResourceId attribute) ERROR (ptufile.PtuStopReason attribute) EVENTLIST (oirfile.METADATA attribute) EVENTS_DROPPED (ptufile.PtuMeasurementWarnings attribute) exactmass (molmass.Element property) (molmass.elements.Element property) EXCLUSION (psdtags.PsdBlendMode attribute) EXIF_DATA_1 (psdtags.PsdResourceId attribute) EXIF_DATA_3 (psdtags.PsdResourceId attribute) EXIF_TAGS (tifffile._TIFF property) exists() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrTiffStore method) expanded (molmass.Formula property) exposure (psdtags.PsdExposure attribute) EXPOSURE (psdtags.PsdKey attribute) EXT_FPGA (ptufile.PtuHwFeatures attribute) extension (tifffile.FileHandle property) EXTRA_LARGE (roifile.ROI_POINT_SIZE attribute) EXTRASAMPLE (class in tifffile)

F

fat_len (oiffile.CompoundFile attribute) fbd_decode() (in module fbdfile) fbd_histogram() (in module fbdfile) fbd_to_b64() (in module fbdfile) FbdFile (class in fbdfile) fbdfile.__version__ (in module fbdfile) FbdFileError (class in fbdfile) fbf (fbdfile.FbdFile attribute) fbf_read() (in module fbdfile) fbs (fbdfile.FbdFile attribute) fbs_read() (in module fbdfile) fei_metadata (tifffile.TiffFile property) FIFO_OVERRUN (ptufile.PtuStopReason attribute) FILE (tifffile.CHUNKMODE attribute) FILE_ERROR (ptufile.PtuStopReason attribute) FILE_EXTENSIONS (tifffile._TIFF property) FILE_FLAGS (tifffile._TIFF property) FILE_PATTERNS (tifffile._TIFF property) file_positions() (czifile.CziAttachmentDirectorySegmentData static method) (czifile.CziSubBlockDirectorySegmentData static method) file_version (psdtags.PsdVersionBlock attribute) FileCache (class in tifffile) FileHandle (class in tifffile) filehandle (czifile.CziFile property) (czifile.CziSegment property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.TiffFile property) (tifffile.TiffWriter property) FileInfo (class in sdtfile) FILEINFO (oirfile.METADATA attribute) filename (czifile.CziAttachmentEntryA1 property) (czifile.CziFile property) (fbdfile.FbdFile property) (lfdfiles.BioradPic property) (lfdfiles.Ccp4Map property) (lfdfiles.FlieOut property) (lfdfiles.FliezDb2 property) (lfdfiles.FliezI16 property) (lfdfiles.FlimageBin property) (lfdfiles.FlimfastFlif property) (lfdfiles.GlobalsAscii property) (lfdfiles.GlobalsLif property) (lfdfiles.LfdFile property) (lfdfiles.RawPal property) (lfdfiles.SimfcsB64 property) (lfdfiles.SimfcsBh property) (lfdfiles.SimfcsBhz property) (lfdfiles.SimfcsBin property) (lfdfiles.SimfcsCyl property) (lfdfiles.SimfcsFit property) (lfdfiles.SimfcsI64 property) (lfdfiles.SimfcsInt property) (lfdfiles.SimfcsIntPhsMod property) (lfdfiles.SimfcsJrn property) (lfdfiles.SimfcsR64 property) (lfdfiles.SimfcsRef property) (lfdfiles.SimfcsVpl property) (lfdfiles.SimfcsVpp property) (lfdfiles.SimfcsZ64 property) (lfdfiles.Vaa3dRaw property) (lfdfiles.VistaIfi property) (lfdfiles.VistaIfli property) (lfdfiles.VistaTdflim property) (lfdfiles.VoxxMap property) (liffile.LifFile property) (netpbmfile.NetpbmFile attribute) (obffile.ObfFile property) (oiffile.CompoundFile attribute) (oiffile.FileSystemAbc attribute) (oiffile.OibFileSystem attribute) (oiffile.OifFile attribute) (oiffile.OifFileSystem attribute) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.TiffFile property) fileno() (tifffile.FileHandle method) FILEOPEN_FILTER (tifffile._TIFF property) filepath (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) FileRevision (class in sdtfile) files() (oiffile.CompoundFile method) (oiffile.FileSystemAbc method) (oiffile.OibFileSystem method) (oiffile.OifFileSystem method) files_missing (lfdfiles.LfdFileSequence property) (lfdfiles.SimfcsGpSeries property) (tifffile.FileSequence property) (tifffile.TiffSequence property) FileSequence (class in tifffile) filesize (czifile.CziFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property)

filesystem (oiffile.OifFile attribute) FileSystemAbc (class in oiffile) filetime() (in module oiffile) FILETYPE (class in tifffile) FILL_OPACITY (psdtags.PsdKey attribute) FILLORDER (class in tifffile) FILTER_EFFECTS (psdtags.PsdKey attribute) FILTER_EFFECTS_2 (psdtags.PsdKey attribute) FILTER_MASK (psdtags.PsdKey attribute) filtered_subblock_directory (czifile.CziFile property) find() (liffile.LifImageSeries method) (obffile.ObfStackSequence method) findall() (liffile.LifImageSeries method) (obffile.ObfStackSequence method) first (tifffile.TiffPages property) flags (psdtags.PsdLayer attribute) (psdtags.PsdLayerMask attribute) (tifffile.TiffFile property) (tifffile.TiffPage property) FlieOut (class in lfdfiles) FliezDb2 (class in lfdfiles) FliezI16 (class in lfdfiles) flimage_metadata (tifffile.TiffFile property) FlimageBin (class in lfdfiles) FLIMBEE (ptufile.PtuScannerType attribute) FlimfastFlif (class in lfdfiles) FLOAT (tifffile.DATATYPE attribute) FLOATINGPOINT (tifffile.PREDICTOR attribute) FLOATINGPOINTX2 (tifffile.PREDICTOR attribute) FLOATINGPOINTX4 (tifffile.PREDICTOR attribute) fluoview_metadata (tifffile.TiffFile property) flush() (tifffile.FileHandle method) fname (dnacurve.Sequence attribute) Focoltone (psdtags.PsdColorSpaceType attribute) footer (obffile.ObfStack attribute) FOREIGN_EFFECT_ID (psdtags.PsdKey attribute) format (psdtags.PsdThumbnailBlock attribute) format() (dnacurve.Sequence method) format_charge() (in module molmass) format_size() (in module tifffile) format_tree() (oiffile.CompoundFile method) Formula (class in molmass) formula (molmass.Formula property) (molmass.FormulaError attribute) FormulaError (class in molmass) fraction (molmass.CompositionItem attribute) (molmass.SpectrumEntry attribute) frame() (liffile.LifImage method) frame_change_mask (ptufile.PtuFile property) frame_dims (liffile.LifImageFrames property) frame_shape (liffile.LifImageFrames property) frame_size (fbdfile.FbdFile attribute) frame_sizes (liffile.LifImageFrames property) frame_time (ptufile.PtuFile property) FRAMED_GROUP (psdtags.PsdKey attribute) FRAMEPROPERTIES (oirfile.METADATA attribute) frames (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (netpbmfile.NetpbmFile attribute) frames() (fbdfile.FbdFile method) FREEHAND (roifile.ROI_TYPE attribute) FREELINE (roifile.ROI_TYPE attribute) frequency (liffile.LifFlimImage property) (ptufile.PtuFile property) from_dict() (tifffile.zarr.Tiff class method) from_elements() (in module molmass) from_fractions() (in module molmass) from_oligo() (in module molmass) from_peptide() (in module molmass) from_sequence() (in module molmass) from_string() (in module molmass) frombytes() (psdtags.PsdBoolean class method) (psdtags.PsdBytesBlock class method) (psdtags.PsdChannel class method) (psdtags.PsdColorBlock class method) (psdtags.PsdEmpty class method) (psdtags.PsdExposure class method) (psdtags.PsdFilterMask class method) (psdtags.PsdInteger class method) (psdtags.PsdKeyABC class method) (psdtags.PsdLayer class method) (psdtags.PsdLayerMask class method) (psdtags.PsdLayers class method) (psdtags.PsdMetadataSettings class method) (psdtags.PsdPascalStringBlock class method) (psdtags.PsdPascalStringsBlock class method) (psdtags.PsdPatterns class method) (psdtags.PsdReferencePoint class method) (psdtags.PsdResourceBlockABC class method) (psdtags.PsdSectionDividerSetting class method) (psdtags.PsdSheetColorSetting class method) (psdtags.PsdString class method) (psdtags.PsdStringBlock class method) (psdtags.PsdStringsBlock class method) (psdtags.PsdTextEngineData class method) (psdtags.PsdThumbnailBlock class method) (psdtags.PsdUnknown class method) (psdtags.PsdUserMask class method) (psdtags.PsdVersionBlock class method) (psdtags.PsdWord class method) (psdtags.TiffImageResources class method) (psdtags.TiffImageSourceData class method) (roifile.ImagejRoi class method) fromdata() (netpbmfile.NetpbmFile class method) fromfile() (obffile.ObfFileHeader class method) (obffile.ObfSiUnit class method) (obffile.ObfStackFooter class method) (obffile.ObfStackHeader class method) (roifile.ImagejRoi class method) (tifffile.TiffTag class method) frompoints() (roifile.ImagejRoi class method) fromtiff() (psdtags.TiffImageResources class method) (psdtags.TiffImageSourceData class method) fstat (tifffile.TiffFile property)

G

gamma (psdtags.PsdExposure attribute) gcd (molmass.Formula property) gdal_metadata (tifffile.TiffFile property) gdal_structural_metadata (tifffile.TiffFile property) GenericT2 (ptufile.PtuRecordType attribute) GenericT3 (ptufile.PtuRecordType attribute) GENI (psdtags.PsdKey attribute) GEO_CODES (tifffile._TIFF property) GEO_KEYS (tifffile._TIFF property) geotiff_metadata (tifffile.TiffFile property) geotiff_tags (tifffile.TiffPage property) get() (czifile.CziPixelType static method) (liffile.LifImageFrames method) (tifffile.TiffPages method) (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrTiffStore method) get_partial_values() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) get_resolution() (tifffile.TiffFrame method) (tifffile.TiffPage method) getall() (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) glob() (oiffile.OifFile method) global_acquisition_time (ptufile.PtuFile property) GLOBAL_ALTITUDE (psdtags.PsdResourceId attribute) GLOBAL_ANGLE (psdtags.PsdResourceId attribute) global_frame_time (ptufile.PtuFile property)

global_line_time (ptufile.PtuFile property) global_pixel_time (ptufile.PtuFile property) global_resolution (liffile.LifFlimImage property) (ptufile.PtuFile property) GlobalsAscii (class in lfdfiles) GlobalsLif (class in lfdfiles) GlobalsLif.Record (class in lfdfiles) GPS_TAGS (tifffile._TIFF property) GRADIENT_FILL_SETTING (psdtags.PsdKey attribute) GRADIENT_MAP (psdtags.PsdKey attribute) Gray (psdtags.PsdColorSpaceType attribute) GRAY (psdtags.PsdColorType attribute) GRAY16 (czifile.CziPixelType attribute) GRAY32 (czifile.CziPixelType attribute) GRAY32FLOAT (czifile.CziPixelType attribute) GRAY64 (czifile.CziPixelType attribute) GRAY64COMPLEXFLOAT (czifile.CziPixelType attribute) GRAY8 (czifile.CziPixelType attribute) GrayFloat (psdtags.PsdColorSpaceType attribute) Grayscale (psdtags.PsdImageMode attribute) GRAYSCALE_HALFTONING_INFO (psdtags.PsdResourceId attribute) GRAYSCALE_TRANSFER_FUNCTION (psdtags.PsdResourceId attribute) GREEN (psdtags.PsdColorType attribute) GRID_AND_GUIDES_INFO (psdtags.PsdResourceId attribute) group (molmass.Element attribute) (molmass.elements.Element attribute) guid (psdtags.PsdPatterns attribute) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) gvd_param (sdtfile.SetupBlock property)

H

HARD_LIGHT (psdtags.PsdBlendMode attribute) HARD_MIX (psdtags.PsdBlendMode attribute) hardware_features (ptufile.PtuFile property) harmonics (fbdfile.FbdFile attribute) has_lock (tifffile.FileHandle property) has_real_merged_data (psdtags.PsdVersionBlock attribute) has_unknowns (psdtags.PsdLayer property) (psdtags.TiffImageSourceData property) hash (tifffile.TiffFrame property) (tifffile.TiffPage property) HDR_TONING_INFO (psdtags.PsdResourceId attribute) header (czifile.CziFile attribute) (fbdfile.FbdFile attribute) (lfdfiles.BioradPic attribute) (lfdfiles.FlimfastFlif attribute) (lfdfiles.VistaIfi attribute) (lfdfiles.VistaIfli attribute) (netpbmfile.NetpbmFile attribute) (obffile.ObfFile attribute) (obffile.ObfStack attribute) (sdtfile.SdtFile attribute) HEIGHT (czifile.CziDimensionType attribute)

height (netpbmfile.NetpbmFile attribute) (psdtags.PsdThumbnailBlock attribute) hexcolor() (roifile.ImagejRoi method) hexdump() (in module tifffile) hill_sorted() (in module molmass) HISTOGRAM (ptufile.PhuMeasurementMode attribute) histogram_resolutions (ptufile.PhuFile property) histograms() (ptufile.PhuFile method) HKS (psdtags.PsdColorSpaceType attribute) HORIZONTAL (tifffile.PREDICTOR attribute) HORIZONTALX2 (tifffile.PREDICTOR attribute) HORIZONTALX4 (tifffile.PREDICTOR attribute) HSB (psdtags.PsdColorSpaceType attribute) HUE (psdtags.PsdBlendMode attribute) HUE_SATURATION (psdtags.PsdKey attribute) HUE_SATURATION_PS4 (psdtags.PsdKey attribute) huron_metadata (tifffile.TiffFile property) HYBRID (roifile.ROI_POINT_TYPE attribute) HydraHarp2T2 (ptufile.PtuRecordType attribute) HydraHarp2T3 (ptufile.PtuRecordType attribute) HydraHarpT2 (ptufile.PtuRecordType attribute) HydraHarpT3 (ptufile.PtuRecordType attribute)

I

ICC_PROFILE (psdtags.PsdResourceId attribute) ICC_UNTAGGED_PROFILE (psdtags.PsdResourceId attribute) ICCLAB (tifffile.PHOTOMETRIC attribute) iccprofile (tifffile.TiffPage property) id (sdtfile.FileInfo attribute) IDS_SEED_NUMBER (psdtags.PsdResourceId attribute) IEEEFP (tifffile.SAMPLEFORMAT attribute) IFD (tifffile.DATATYPE attribute) IFD8 (tifffile.DATATYPE attribute) ILLUMINATION (czifile.CziDimensionType attribute) IMAGE (ptufile.PtuMeasurementSubMode attribute) image (roifile.ImagejRoi property) IMAGE (roifile.ROI_SUBTYPE attribute) (tifffile.OFILETYPE attribute) IMAGE_COMPRESSIONS (tifffile._TIFF property) IMAGE_MODE_RAW (psdtags.PsdResourceId attribute) IMAGE_READY_7_ROLLOVER_EXPANDED_STATE (psdtags.PsdResourceId attribute) IMAGE_READY_DATA_SETS (psdtags.PsdResourceId attribute) IMAGE_READY_DEFAULT_SELECTED_STATE (psdtags.PsdResourceId attribute) IMAGE_READY_ROLLOVER_EXPANDED_STATE (psdtags.PsdResourceId attribute) IMAGE_READY_SAVE_LAYER_SETTINGS (psdtags.PsdResourceId attribute) IMAGE_READY_VARIABLES (psdtags.PsdResourceId attribute) IMAGE_READY_VERSION (psdtags.PsdResourceId attribute) IMAGEDEFINITION (oirfile.METADATA attribute) imagej_description (tifffile.TiffPage property) imagej_description() (in module tifffile) imagej_metadata (tifffile.TiffFile property) imagej_metadata_tag() (in module tifffile) ImagejRoi (class in roifile) imagemode (psdtags.PsdPatterns attribute) images (liffile.LifFile property) IMPACJ (tifffile.COMPRESSION attribute) imread (lfdfiles.LfdFileSequence attribute) (lfdfiles.SimfcsGpSeries attribute) (tifffile.FileSequence attribute) (tifffile.TiffSequence attribute) imread() (in module czifile) (in module liffile) (in module netpbmfile) (in module obffile) (in module oiffile) (in module oirfile) (in module ptufile) (in module tifffile) imsave() (in module netpbmfile) imshow() (in module tifffile) imwrite() (in module netpbmfile) (in module ptufile) (in module tifffile) INCH (tifffile.RESUNIT attribute) index (tifffile.TiffFrame property) (tifffile.TiffPage property) Indexed (psdtags.PsdImageMode attribute) INDEXED_COLOR_TABLE_COUNT (psdtags.PsdResourceId attribute) indica_metadata (tifffile.TiffFile property) indices (lfdfiles.LfdFileSequence attribute) (lfdfiles.SimfcsGpSeries attribute) (tifffile.FileSequence attribute) (tifffile.TiffSequence attribute) indices() (tifffile.TiledSequence method) info (psdtags.PsdLayer attribute) (psdtags.TiffImageSourceData attribute) (sdtfile.SdtFile attribute) init_decode() (tifffile.TiffPage method) INPT_RATE_RATIO (ptufile.PtuMeasurementWarnings attribute) INPT_RATE_TOO_HIGH (ptufile.PtuMeasurementWarnings attribute) INPT_RATE_ZERO (ptufile.PtuMeasurementWarnings attribute) INPUT_MODES (ptufile.PtuHwFeatures attribute) INT (tifffile.SAMPLEFORMAT attribute) INTEGRATING (ptufile.PhuMeasurementSubMode attribute) intensity (molmass.SpectrumEntry attribute) INVERT (psdtags.PsdKey attribute) (psdtags.PsdLayerMaskFlag attribute) ionenergy (molmass.Element attribute) (molmass.elements.Element attribute) IOP_TAGS (tifffile._TIFF property) IPTC_NAA (psdtags.PsdResourceId attribute) IRRELEVANT (psdtags.PsdLayerFlag attribute) is_32bit (fbdfile.FbdFile attribute) is_agilent (tifffile.TiffPage property) is_andor (tifffile.TiffPage property) is_appendable (tifffile.TiffFile property) is_astrotiff (tifffile.TiffPage property) is_avs (tifffile.TiffPage property) is_bgr (psdtags.PsdThumbnailBlock property) is_bidirectional (liffile.LifFlimImage property) (ptufile.PtuFile property) is_bif (tifffile.TiffPage property) is_bigtiff (tifffile.TiffFile property) (tifffile.TiffFormat property) is_c2pa (tifffile.TiffFile property) (tifffile.TiffPage property) is_contiguous (tifffile.TiffFrame property) (tifffile.TiffPage property) is_dicom (tifffile.TiffFile property) is_dng (tifffile.TiffPage property) is_downsampled (czifile.CziImage property) is_eer (tifffile.TiffPage property) is_epics (tifffile.TiffPage property)

is_fei (tifffile.TiffPage property) is_file (tifffile.FileHandle property) is_final (tifffile.TiffFrame property) (tifffile.TiffPage property) is_flim (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) is_flimage (tifffile.TiffPage property) is_fluoview (tifffile.TiffPage property) is_frame (tifffile.TiffFrame property) (tifffile.TiffPage property) is_gdal (tifffile.TiffPage property) is_geotiff (tifffile.TiffPage property) is_huron (tifffile.TiffPage property) is_image (ptufile.PtuFile property) is_imagej (tifffile.TiffPage property) is_indica (tifffile.TiffPage property) is_jfif (tifffile.TiffPage property) is_lsm (tifffile.TiffPage property) is_mask (tifffile.TiffPage property) is_mdgel (tifffile.TiffFile property) (tifffile.TiffPage property) is_mediacy (tifffile.TiffPage property) is_memmappable (tifffile.TiffFrame property) (tifffile.TiffPage property) is_metaseries (tifffile.TiffPage property) is_micromanager (tifffile.TiffPage property) is_mmstack (tifffile.TiffFile property) is_mrc (tifffile.TiffPage property) is_multifile (tifffile.TiffPageSeries attribute) is_multipage (tifffile.TiffPage property) (tifffile.TiffPages property) is_multiscales (tifffile.zarr.ZarrFileSequenceStore property) (tifffile.zarr.ZarrStore property) (tifffile.zarr.ZarrTiffStore property) is_ndpi (tifffile.TiffFormat property) (tifffile.TiffPage property) is_ndtiff (tifffile.TiffFile property) is_nih (tifffile.TiffPage property) is_nuvu (tifffile.TiffPage property) is_oib (oiffile.OifFile property) is_ome (tifffile.TiffPage property) is_philips (tifffile.TiffPage property) is_pilatus (tifffile.TiffPage property) is_planar (tifffile.StoredShape property) is_pyramid (czifile.CziImage property) is_pyramid_level (czifile.CziImage property) is_pyramidal (tifffile.TiffPageSeries property) is_qpi (tifffile.TiffPage property) is_reduced (tifffile.TiffPage property) is_scanimage (tifffile.TiffPage property) is_scn (tifffile.TiffPage property) is_sem (tifffile.TiffPage property) is_shaped (tifffile.TiffPage property) is_sinusoidal (liffile.LifFlimImage property) (ptufile.PtuFile property) is_sis (tifffile.TiffFile property) (tifffile.TiffPage property) is_stk (tifffile.TiffPage property) is_streak (tifffile.TiffPage property) is_subifd (tifffile.TiffFrame property) (tifffile.TiffPage property) is_subsampled (tifffile.TiffPage property) is_svs (tifffile.TiffFile property) (tifffile.TiffPage property) is_t3 (ptufile.PtuFile property) is_tiffep (tifffile.TiffPage property) is_tiled (tifffile.TiffPage property) (tifffile.TiledSequence property) is_truncated (tifffile.TiffPageSeries attribute) is_tvips (tifffile.TiffPage property) is_uniform (tifffile.TiffFile property) is_upsampled (czifile.CziImage property) is_valid (tifffile.StoredShape property) is_virtual (tifffile.TiffFrame property) (tifffile.TiffPage property) is_vista (tifffile.TiffPage property) is_volumetric (tifffile.TiffPage property) isb64 (psdtags.PsdFormat property) Isotope (class in molmass) (class in molmass.elements) isotope (molmass.Formula property) isotopes (molmass.Element attribute) (molmass.elements.Element attribute) IT8BL (tifffile.COMPRESSION attribute) IT8CTPAD (tifffile.COMPRESSION attribute) IT8LW (tifffile.COMPRESSION attribute) IT8MP (tifffile.COMPRESSION attribute) items (psdtags.PsdMetadataSettings attribute) items() (liffile.LifImageFrames method) (molmass.Composition method) (molmass.Spectrum method) (tifffile.TiffTagRegistry method) (tifffile.TiffTags method) itemsize (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (ptufile.PtuFile property) ITULAB (tifffile.PHOTOMETRIC attribute)

J

JBIG (tifffile.COMPRESSION attribute) JBIG2 (tifffile.COMPRESSION attribute) JBIG_BW (tifffile.COMPRESSION attribute) JBIG_COLOR (tifffile.COMPRESSION attribute) JETRAW (tifffile.COMPRESSION attribute) join_charge() (in module molmass) JPEG (czifile.CziCompressionType attribute) (tifffile.COMPRESSION attribute) JPEG2000 (tifffile.COMPRESSION attribute) JPEG_2000_LOSSY (tifffile.COMPRESSION attribute) JPEG_99 (tifffile.COMPRESSION attribute)

JPEG_LOSSY (tifffile.COMPRESSION attribute) JPEG_QUALITY (psdtags.PsdResourceId attribute) JPEGLL (czifile.CziCompressionType attribute) JPEGXL (tifffile.COMPRESSION attribute) JPEGXL_DNG (tifffile.COMPRESSION attribute) JPEGXR (czifile.CziCompressionType attribute) (tifffile.COMPRESSION attribute) JPEGXR_NDPI (tifffile.COMPRESSION attribute) JPG (czifile.CziContentFileType attribute) (liffile.LifMemoryBlockType attribute) JUMP_TO_XPEP (psdtags.PsdResourceId attribute)

K

key (psdtags.PsdBoolean attribute) (psdtags.PsdEmpty attribute) (psdtags.PsdExposure attribute) (psdtags.PsdFilterMask attribute) (psdtags.PsdInteger attribute) (psdtags.PsdKeyABC attribute) (psdtags.PsdLayers attribute) (psdtags.PsdMetadataSetting attribute) (psdtags.PsdMetadataSettings attribute) (psdtags.PsdPatterns attribute) (psdtags.PsdReferencePoint attribute) (psdtags.PsdSectionDividerSetting attribute) (psdtags.PsdSheetColorSetting attribute) (psdtags.PsdString attribute) (psdtags.PsdTextEngineData attribute) (psdtags.PsdUnknown attribute) (psdtags.PsdUserMask attribute) (psdtags.PsdWord attribute)

keyframe (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPages property) (tifffile.TiffPageSeries attribute) keys() (liffile.LifImageFrames method) (molmass.Composition method) (molmass.Spectrum method) (tifffile.TiffTags method) kind (psdtags.PsdSectionDividerSetting attribute) (tifffile.TiffPageSeries attribute) KNOCKOUT_SETTING (psdtags.PsdKey attribute) KODAK_262 (tifffile.COMPRESSION attribute)

L

Lab (psdtags.PsdColorSpaceType attribute) (psdtags.PsdImageMode attribute) labels (lfdfiles.Ccp4Map attribute) LARGE (roifile.ROI_POINT_SIZE attribute) laser_factor (fbdfile.FbdFile attribute) laser_frequency (fbdfile.FbdFile attribute) LAYER (psdtags.PsdKey attribute) LAYER_16 (psdtags.PsdKey attribute) LAYER_32 (psdtags.PsdKey attribute) LAYER_COMPS (psdtags.PsdResourceId attribute) LAYER_GROUP_INFO (psdtags.PsdResourceId attribute) LAYER_GROUPS_ENABLED_ID (psdtags.PsdResourceId attribute) LAYER_ID (psdtags.PsdKey attribute) LAYER_MASK_AS_GLOBAL_MASK (psdtags.PsdKey attribute) LAYER_NAME_SOURCE_SETTING (psdtags.PsdKey attribute) LAYER_SELECTION_IDS (psdtags.PsdResourceId attribute) LAYER_STATE_INFO (psdtags.PsdResourceId attribute) LAYER_VERSION (psdtags.PsdKey attribute) layers (psdtags.PsdLayers attribute) (psdtags.TiffImageSourceData attribute) LE32BIT (psdtags.PsdFormat attribute) LE64BIT (psdtags.PsdFormat attribute) LEFTBOT (tifffile.ORIENTATION attribute) LEFTTOP (tifffile.ORIENTATION attribute) LEGACY_ERROR (ptufile.PtuStopReason attribute) LERC (tifffile.COMPRESSION attribute) levels (czifile.CziImage property) LEVELS (psdtags.PsdKey attribute) levels (tifffile.TiffPageSeries attribute) LfdFile (class in lfdfiles) LfdFileError (class in lfdfiles) lfdfiles.__version__ (in module lfdfiles) lfdfiles.FILE_EXTENSIONS (in module lfdfiles) LfdFileSequence (class in lfdfiles) LIF (liffile.LifFileType attribute) lifetime() (lfdfiles.VistaTdflim method) LIFEXT (liffile.LifFileType attribute) LifFile (class in liffile) liffile.__version__ (in module liffile) liffile.FILE_EXTENSIONS (in module liffile) LifFileError (class in liffile) LifFileType (class in liffile) LifFlimImage (class in liffile) LifImage (class in liffile) LifImageABC (class in liffile) LifImageFrames (class in liffile) LifImageSeries (class in liffile) LifMemoryBlock (class in liffile) LifMemoryBlockType (class in liffile) LifTileScanInfo (class in liffile) LIGHTEN (psdtags.PsdBlendMode attribute) LIGHTER_COLOR (psdtags.PsdBlendMode attribute) LIGHTROOM_WORKFLOW (psdtags.PsdResourceId attribute)

LINE (ptufile.PtuMeasurementSubMode attribute) (roifile.ROI_TYPE attribute) line_roi (oirfile.OirReference property) line_start_mask (ptufile.PtuFile property) line_stop_mask (ptufile.PtuFile property) line_time (ptufile.PtuFile property) LINEAR_BURN (psdtags.PsdBlendMode attribute) LINEAR_DODGE (psdtags.PsdBlendMode attribute) LINEAR_LIGHT (psdtags.PsdBlendMode attribute) LINEAR_RAW (tifffile.PHOTOMETRIC attribute) lines_in_frame (ptufile.PtuFile property) LINKED_LAYER (psdtags.PsdKey attribute) LINKED_LAYER_2 (psdtags.PsdKey attribute) LINKED_LAYER_3 (psdtags.PsdKey attribute) LINKED_LAYER_EXTERNAL (psdtags.PsdKey attribute) list() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) list_dir() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) list_prefix() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) lock (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.FileHandle property) LOF (liffile.LifFileType attribute) (liffile.LifMemoryBlockType attribute) logger() (in module czifile) (in module roifile) (in module tifffile) LOGL (tifffile.PHOTOMETRIC attribute) LOGLUV (tifffile.PHOTOMETRIC attribute) LONG (tifffile.DATATYPE attribute) LONG8 (tifffile.DATATYPE attribute) LOW_RES (ptufile.PtuHwFeatures attribute) LSB2MSB (tifffile.FILLORDER attribute) LSM (ptufile.PtuScannerType attribute) lsm_metadata (tifffile.TiffFile property) LSMIMAGE (oirfile.METADATA attribute) LUMINOSITY (psdtags.PsdBlendMode attribute) LURADOC (tifffile.COMPRESSION attribute) LUT (oirfile.METADATA attribute) LZMA (tifffile.COMPRESSION attribute) LZW (czifile.CziCompressionType attribute) (tifffile.COMPRESSION attribute)

M

MAC_NSPRINTINFO (psdtags.PsdResourceId attribute) MAC_PAGE_FORMAT_INFO (psdtags.PsdResourceId attribute) MAC_PRINT_MANAGER_INFO (psdtags.PsdResourceId attribute) MACRO (tifffile.FILETYPE attribute) magicnumber (netpbmfile.NetpbmFile attribute) main() (in module dnacurve) (in module dnacurve.web) (in module molmass) (in module molmass.web) mainfile (oiffile.FileSystemAbc attribute) (oiffile.OibFileSystem attribute) (oiffile.OifFile attribute) (oiffile.OifFileSystem attribute) MANUAL (ptufile.PtuStopReason attribute) map_src (lfdfiles.Ccp4Map attribute) MARKER (czifile.CziEventType attribute) MARKERS (ptufile.PtuHwFeatures attribute) MASK (tifffile.FILETYPE attribute) (tifffile.PHOTOMETRIC attribute) mask() (czifile.CziSubBlockSegmentData method) mass (molmass.CompositionItem attribute) (molmass.Element attribute) (molmass.elements.Element attribute) (molmass.elements.Isotope attribute) (molmass.elements.Particle attribute) (molmass.Formula property) (molmass.Isotope attribute) (molmass.Particle attribute) (molmass.SpectrumEntry attribute) mass_charge_ratio() (in module molmass) mass_for_molarity() (molmass.Formula method) mass_from_moles() (molmass.Formula method) massnumber (molmass.elements.Isotope attribute) (molmass.Isotope attribute) (molmass.SpectrumEntry attribute) matlabstr2py() (in module tifffile) matrices (dnacurve.Model attribute) maxcache (czifile.CziFile property) MAXIOWORKERS (tifffile._TIFF property) maxval (netpbmfile.NetpbmFile attribute) MAXWORKERS (tifffile._TIFF property) maxworkers (tifffile.TiffPage property) MCL (ptufile.PtuScannerType attribute) mdgel_metadata (tifffile.TiffFile property) MDI_BINARY (tifffile.COMPRESSION attribute) MDI_PROGRESSIVE (tifffile.COMPRESSION attribute) MDI_VECTOR (tifffile.COMPRESSION attribute) mean (molmass.Spectrum property) measure_info (sdtfile.SdtFile attribute) measurement_mode (ptufile.PhuFile property) (ptufile.PtuFile property) measurement_ndim (ptufile.PtuFile property) MEASUREMENT_SCALE (psdtags.PsdResourceId attribute) measurement_submode (ptufile.PhuFile property) (ptufile.PtuFile property) measurement_warnings (ptufile.PtuFile property) MEDIUM (roifile.ROI_POINT_SIZE attribute) MEM (liffile.LifMemoryBlockType attribute) memmap() (in module tifffile)

memmap_array() (tifffile.FileHandle method) memmapped (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) memory_block (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) memory_blocks (liffile.LifFile attribute) message (molmass.FormulaError attribute) METADATA (class in oirfile) metadata (tifffile.zarr.Tiff attribute) metadata() (czifile.CziFile method) (czifile.CziSubBlockSegmentData method) metadata_offset (czifile.CziSubBlockSegmentData property) metadata_segment (czifile.CziFile property) METADATA_SETTING (psdtags.PsdKey attribute) metaseries_metadata (tifffile.TiffFile property) micromanager_metadata (tifffile.TiffFile property) MICROMETER (tifffile.RESUNIT attribute) MILLIMETER (tifffile.RESUNIT attribute) min_int_coord() (roifile.ImagejRoi static method) mini_stream_cutoff_size (oiffile.CompoundFile attribute) minifat_len (oiffile.CompoundFile attribute) minifat_start (oiffile.CompoundFile attribute) MINISBLACK (tifffile.PHOTOMETRIC attribute) MINISWHITE (tifffile.PHOTOMETRIC attribute) MM_DIMENSIONS (tifffile._TIFF property) MM_HEADER (tifffile._TIFF property) Model (class in dnacurve) molarity() (molmass.Formula method) molarity_to_ppm() (molmass.Formula method) moles() (molmass.Formula method) molmass.__version__ (in module molmass) molmass.AMINOACIDS (in module molmass) molmass.DEOXYNUCLEOTIDES (in module molmass) molmass.ELEMENTARY_CHARGE (in module molmass) molmass.elements.ELEMENTARY_CHARGE (in module molmass) molmass.GROUPS (in module molmass) molmass.NUCLEOTIDES (in module molmass) molmass.PREPROCESSORS (in module molmass) MonitorRGB (psdtags.PsdColorSpaceType attribute) monoisotopic_mass (molmass.Formula property) MOSAIC (czifile.CziDimensionType attribute) mpp (czifile.CziImage property) (tifffile.TiffPageSeries property) MSB2LSB (tifffile.FILLORDER attribute) MULTI_SUBBLOCK (czifile.CziPyramidType attribute) Multichannel (psdtags.PsdImageMode attribute) MULTIPLY (psdtags.PsdBlendMode attribute) mz (molmass.elements.Isotope property) (molmass.Formula property) (molmass.Isotope property) (molmass.SpectrumEntry attribute)

N

name (czifile.CziFile property) (czifile.CziImage property) (dnacurve.CurvedDNA property) (dnacurve.Model attribute) (dnacurve.Sequence attribute) (fbdfile.FbdFile property) (lfdfiles.SimfcsVpl attribute) (liffile.LifFile property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (molmass.Element attribute) (molmass.elements.Element attribute) (molmass.elements.Particle attribute) (molmass.Particle attribute) (obffile.ObfFile property) (obffile.ObfStack property) (oiffile.FileSystemAbc attribute) (oiffile.OibFileSystem attribute) (oiffile.OifFileSystem attribute) (oiffile.SettingsFile attribute) (oirfile.OirFile property) (psdtags.PsdLayer attribute) (psdtags.PsdPatterns attribute) (psdtags.PsdResourceBlockABC attribute) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) (tifffile.FileHandle property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries attribute) (tifffile.TiffTag property) name_offset (czifile.CziAttachmentEntryA1 property) names (lfdfiles.SimfcsVpp attribute) natural_sorted() (in module tifffile) nbytes (czifile.CziImage property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PtuFile property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) ndim (czifile.CziDirectoryEntryDV property) (czifile.CziImage property) (lfdfiles.BioradPic property) (lfdfiles.Ccp4Map property) (lfdfiles.FlieOut property) (lfdfiles.FliezDb2 property) (lfdfiles.FliezI16 property) (lfdfiles.FlimageBin property) (lfdfiles.FlimfastFlif property) (lfdfiles.GlobalsAscii property) (lfdfiles.GlobalsLif property) (lfdfiles.LfdFile property) (lfdfiles.RawPal property) (lfdfiles.SimfcsB64 property) (lfdfiles.SimfcsBh property) (lfdfiles.SimfcsBhz property) (lfdfiles.SimfcsBin property) (lfdfiles.SimfcsCyl property) (lfdfiles.SimfcsFit property) (lfdfiles.SimfcsI64 property) (lfdfiles.SimfcsInt property) (lfdfiles.SimfcsIntPhsMod property) (lfdfiles.SimfcsJrn property) (lfdfiles.SimfcsR64 property) (lfdfiles.SimfcsRef property) (lfdfiles.SimfcsVpl property) (lfdfiles.SimfcsVpp property) (lfdfiles.SimfcsZ64 property) (lfdfiles.Vaa3dRaw property) (lfdfiles.VistaIfi property) (lfdfiles.VistaIfli property) (lfdfiles.VistaTdflim property) (lfdfiles.VoxxMap property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) (tifffile.TiledSequence property)

ndims (ptufile.PtuFile property) NDPI_LE (tifffile._TIFF property) NDPI_TAGS (tifffile._TIFF property) ndpi_tags (tifffile.TiffPage property) NESTED_SECTION_DIVIDER_SETTING (psdtags.PsdKey attribute) NetpbmFile (class in netpbmfile) netpbmfile.__version__ (in module netpbmfile) NEUTRON (in module molmass) (in module molmass.elements) neutrons (molmass.Element property) (molmass.elements.Element property) NEXT (tifffile.COMPRESSION attribute) next_page_offset (tifffile.TiffPages property) NIH_COLORTABLE_TYPE (tifffile._TIFF property) NIH_CURVEFIT_TYPE (tifffile._TIFF property) NIH_IMAGE_HEADER (tifffile._TIFF property) NIH_LUTMODE_TYPE (tifffile._TIFF property) nih_metadata (tifffile.TiffFile property) NIH_UNITS_TYPE (tifffile._TIFF property) NIKON_NEF (tifffile.COMPRESSION attribute) nominal_mass (molmass.Formula property) nominalmass (molmass.Element property) (molmass.elements.Element property) NON_BASE (psdtags.PsdClippingType attribute) NONE (czifile.CziPyramidType attribute) (psdtags.PsdColorType attribute) (roifile.ROI_OPTIONS attribute) (tifffile.COMPRESSION attribute) (tifffile.PREDICTOR attribute) (tifffile.RESUNIT attribute) NORMAL (psdtags.PsdBlendMode attribute) normalize_shape() (ptufile.PtuWriter static method) NOROI (roifile.ROI_TYPE attribute) notes (lfdfiles.BioradPic attribute) nullfunc() (in module tifffile) number (molmass.Element attribute) (molmass.elements.Element attribute) number_bins (ptufile.PtuFile property) number_bins_in_period (liffile.LifFlimImage property) (ptufile.PtuFile property) number_bins_max (ptufile.PtuFile property) number_channels (ptufile.PtuFile property) number_channels_max (ptufile.PtuFile property) number_histograms (ptufile.PhuFile property) number_images (ptufile.PtuFile property) number_lines (ptufile.PtuFile property) number_markers (ptufile.PtuFile property) number_photons (ptufile.PtuFile property) number_records (ptufile.PtuFile property) nuvu_metadata (tifffile.TiffFile property) nuvu_tags (tifffile.TiffPage property)

O

ObfFile (class in obffile) obffile.__version__ (in module obffile) obffile.FILE_EXTENSIONS (in module obffile) ObfFileError (class in obffile) ObfFileHeader (class in obffile) ObfSiUnit (class in obffile) ObfStack (class in obffile) ObfStackFooter (class in obffile) ObfStackHeader (class in obffile) ObfStackSequence (class in obffile) OBJECT_BASED_EFFECTS_LAYER_INFO (psdtags.PsdKey attribute) objective (czifile.CziImage property) OBSOLETE (psdtags.PsdLayerFlag attribute) OBSOLETE_1 (psdtags.PsdResourceId attribute) OBSOLETE_2 (psdtags.PsdResourceId attribute) OBSOLETE_3 (psdtags.PsdResourceId attribute) OBSOLETE_4 (psdtags.PsdResourceId attribute) OBSOLETE_5 (psdtags.PsdResourceId attribute) OCIO (psdtags.PsdKey attribute) offset (psdtags.PsdExposure attribute) (psdtags.PsdLayer property) (psdtags.PsdLayerMask property) (psdtags.PsdRectangle property) (psdtags.PsdVirtualMemoryArray property) (tifffile.TiffPage attribute) OFFSET_UNNECESSARY (ptufile.PtuMeasurementWarnings attribute) offsets (lfdfiles.VistaIfli attribute) OFILETYPE (class in tifffile) oib2oif() (in module oiffile) OibFileSystem (class in oiffile) OifFile (class in oiffile) oiffile.__version__ (in module oiffile) OifFileError (class in oiffile) OifFileSystem (class in oiffile) OirChannel (class in oirfile) OirFile (class in oirfile) oirfile.__version__ (in module oirfile) oirfile.FILE_EXTENSIONS (in module oirfile) OirFileError (class in oirfile) OirReference (class in oirfile) OJPEG (tifffile.COMPRESSION attribute) oligonucleotides() (in module dnacurve) oligos (dnacurve.Model attribute) OME (liffile.LifMemoryBlockType attribute) ome_metadata (tifffile.TiffFile property) OmeXml (class in tifffile) OmeXmlError (class in tifffile) ONION_SKINS (psdtags.PsdResourceId attribute) Opacity (psdtags.PsdColorSpaceType attribute) OpacityFloat (psdtags.PsdColorSpaceType attribute) open() (lfdfiles.BioradPic class method) (lfdfiles.Ccp4Map class method) (lfdfiles.FlieOut class method) (lfdfiles.FliezDb2 class method) (lfdfiles.FliezI16 class method) (lfdfiles.FlimageBin class method) (lfdfiles.FlimfastFlif class method) (lfdfiles.GlobalsAscii class method) (lfdfiles.GlobalsLif class method) (lfdfiles.LfdFile class method) (lfdfiles.RawPal class method) (lfdfiles.SimfcsB64 class method) (lfdfiles.SimfcsBh class method) (lfdfiles.SimfcsBhz class method) (lfdfiles.SimfcsBin class method) (lfdfiles.SimfcsCyl class method) (lfdfiles.SimfcsFit class method) (lfdfiles.SimfcsI64 class method) (lfdfiles.SimfcsInt class method) (lfdfiles.SimfcsIntPhsMod class method) (lfdfiles.SimfcsJrn class method) (lfdfiles.SimfcsR64 class method) (lfdfiles.SimfcsRef class method) (lfdfiles.SimfcsVpl class method) (lfdfiles.SimfcsVpp class method) (lfdfiles.SimfcsZ64 class method) (lfdfiles.Vaa3dRaw class method) (lfdfiles.VistaIfi class method) (lfdfiles.VistaIfli class method) (lfdfiles.VistaTdflim class method) (lfdfiles.VoxxMap class method) (tifffile.FileCache method) (tifffile.FileHandle method)

open_file() (oiffile.CompoundFile method) (oiffile.FileSystemAbc method) (oiffile.OibFileSystem method) (oiffile.OifFile method) (oiffile.OifFileSystem method) OPEN_FOLDER (psdtags.PsdSectionDividerType attribute) options (roifile.ImagejRoi attribute) ORANGE (psdtags.PsdColorType attribute) order (dnacurve.Model attribute) ORIENTATION (class in tifffile) origin (lfdfiles.BioradPic attribute) ORIGIN_PATH_INFO (psdtags.PsdResourceId attribute) OSCILLOSCOPE (ptufile.PhuMeasurementSubMode attribute) OTHER (psdtags.PsdSectionDividerType attribute) OUT_OF_MEMORY (ptufile.PtuStopReason attribute) OUTLINE (roifile.ROI_OPTIONS attribute) OVAL (roifile.ROI_TYPE attribute) OVERFLOW (ptufile.PtuStopReason attribute) OVERLAY (oirfile.METADATA attribute) (psdtags.PsdBlendMode attribute) overlay() (in module psdtags) OVERLAY_BACKGROUNDS (roifile.ROI_OPTIONS attribute) OVERLAY_BOLD (roifile.ROI_OPTIONS attribute) OVERLAY_LABELS (roifile.ROI_OPTIONS attribute) OVERLAY_NAMES (roifile.ROI_OPTIONS attribute) overwrite() (tifffile.TiffTag method) overwrite_description() (tifffile.TiffWriter method) oxistates (molmass.Element attribute) (molmass.elements.Element attribute)

P

p_fit() (lfdfiles.SimfcsFit method) pack() (psdtags.PsdFormat method) pack_size() (psdtags.PsdFormat method) PACKBITS (tifffile.COMPRESSION attribute) packed (czifile.CziSegmentId property) PACKED_RAW (tifffile.COMPRESSION attribute) PAGE (tifffile.CHUNKMODE attribute) (tifffile.FILETYPE attribute) (tifffile.OFILETYPE attribute) PAGE_FLAGS (tifffile._TIFF property) page_shape (tifffile.StoredShape property) page_size (tifffile.StoredShape property) pages (tifffile.TiffFile attribute) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) PALETTE (tifffile.PHOTOMETRIC attribute) Pantone (psdtags.PsdColorSpaceType attribute) param_flags (psdtags.PsdLayerMask property) parent (liffile.LifFile property) (liffile.LifFlimImage attribute) (liffile.LifImage attribute) (liffile.LifImageABC attribute) (tifffile.TiffPage attribute) (tifffile.TiffPageSeries attribute) parent_image (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) parse_filenames() (in module tifffile) parse_kwargs() (in module tifffile) Particle (class in molmass) (class in molmass.elements) PASS_THROUGH (psdtags.PsdBlendMode attribute) path (liffile.LifFlimImage attribute) (liffile.LifImage attribute) (liffile.LifImageABC attribute) (tifffile.FileHandle property) path2coords() (roifile.ImagejRoi static method) PATH_INFO (psdtags.PsdResourceId attribute) PATH_SELECTION_STATE (psdtags.PsdResourceId attribute) PATT (psdtags.PsdKey attribute) PATTERN_DATA (psdtags.PsdKey attribute) PATTERN_FILL_SETTING (psdtags.PsdKey attribute) PATTERNS (psdtags.PsdKey attribute) PATTERNS_2 (psdtags.PsdKey attribute) PATTERNS_3 (psdtags.PsdKey attribute) PCK (ptufile.PqFileType attribute) PCO (ptufile.PqFileType attribute) pdb() (dnacurve.CurvedDNA method) pdiv (fbdfile.FbdFile attribute) peak (molmass.Spectrum property) period (molmass.Element attribute) (molmass.elements.Element attribute) pformat() (in module tifffile) PFS (ptufile.PqFileType attribute) PHASE (czifile.CziDimensionType attribute) philips_metadata (tifffile.TiffFile property) PHOTO_FILTER (psdtags.PsdKey attribute) PHOTOMETRIC (class in tifffile) PHOTOMETRIC_SAMPLES (tifffile._TIFF property) photometric_samples (tifffile.StoredShape property) PHOTOSHOP5 (psdtags.PsdLayerFlag attribute) PHU (ptufile.PqFileType attribute) PhuFile (class in ptufile) PhuMeasurementMode (class in ptufile) PhuMeasurementSubMode (class in ptufile) PI_E710 (ptufile.PtuScannerType attribute) PI_E725 (ptufile.PtuScannerType attribute) PI_E727 (ptufile.PtuScannerType attribute) PI_LINEWBS (ptufile.PtuScannerType attribute) PicoHarpT2 (ptufile.PtuRecordType attribute) PicoHarpT3 (ptufile.PtuRecordType attribute) PILATUS_HEADER (tifffile._TIFF property) pilatus_metadata (tifffile.TiffFile property) PIN_LIGHT (psdtags.PsdBlendMode attribute) PIXARFILM (tifffile.COMPRESSION attribute) PIXARLOG (tifffile.COMPRESSION attribute) PIXEL_ASPECT_RATIO (psdtags.PsdResourceId attribute) pixel_dwell_time (fbdfile.FbdFile attribute) PIXEL_SOURCE_DATA (psdtags.PsdKey attribute) PIXEL_SOURCE_DATA_CC15 (psdtags.PsdKey attribute) pixel_time (liffile.LifFlimImage property) (ptufile.PtuFile property) pixels_in_frame (ptufile.PtuFile property) pixels_in_line (ptufile.PtuFile property) pixeltype (czifile.CziImage property) PIXTIFF (tifffile.COMPRESSION attribute) PLACED_LAYER (psdtags.PsdKey attribute) PLACED_LAYER_CS3 (psdtags.PsdKey attribute) PLANARCONFIG (class in tifffile) planarconfig (tifffile.StoredShape property) PLANE (tifffile.CHUNKMODE attribute) plot() (dnacurve.CurvedDNA method) (fbdfile.FbdFile method) (ptufile.PhuFile method) (ptufile.PtuFile method) (roifile.ImagejRoi method) PLUGIN_RESOURCE (psdtags.PsdResourceId attribute) pmax (fbdfile.FbdFile property) PNG (liffile.LifMemoryBlockType attribute) (tifffile.COMPRESSION attribute) point (psdtags.PsdPatterns attribute) POINT (ptufile.PtuMeasurementSubMode attribute) (roifile.ROI_TYPE attribute)

point_size (roifile.ImagejRoi property) point_type (roifile.ImagejRoi property) PoirFile (class in oirfile) POLYGON (roifile.ROI_TYPE attribute) POLYLINE (roifile.ROI_TYPE attribute) position (molmass.FormulaError attribute) POSITRON (in module molmass) (in module molmass.elements) POSTERIZE (psdtags.PsdKey attribute) ppm_to_molarity() (molmass.Formula method) PQDAT (ptufile.PqFileType attribute) PqFile (class in ptufile) PqFileError (class in ptufile) PqFileType (class in ptufile) PQRES (ptufile.PqFileType attribute) PQUNI (ptufile.PqFileType attribute) PREDICTOR (class in tifffile) PREDICTORS (tifffile._TIFF property) print() (tifffile.Timer method) PRINT_FLAGS (psdtags.PsdResourceId attribute) PRINT_FLAGS_INFO (psdtags.PsdResourceId attribute) PRINT_INFO_CS2 (psdtags.PsdResourceId attribute) PRINT_INFO_CS5 (psdtags.PsdResourceId attribute) PRINT_SCALE (psdtags.PsdResourceId attribute) PRINT_STYLE (psdtags.PsdResourceId attribute) product() (in module tifffile) PROG_DEADTIME (ptufile.PtuHwFeatures attribute) PROG_HYSTERESES (ptufile.PtuHwFeatures attribute) PROMPT_BEFORE_DELETING (roifile.ROI_OPTIONS attribute) properties (roifile.ImagejRoi property) PROTECTED_SETTING (psdtags.PsdKey attribute) PROTON (in module molmass) (in module molmass.elements) protons (molmass.Element property) (molmass.elements.Element property) PsdBlendMode (class in psdtags) PsdBoolean (class in psdtags) PsdBytesBlock (class in psdtags) PsdChannel (class in psdtags) PsdChannelId (class in psdtags) PsdClippingType (class in psdtags) PsdColorBlock (class in psdtags) PsdColorSpaceType (class in psdtags) PsdColorType (class in psdtags) PsdCompressionType (class in psdtags) PsdEmpty (class in psdtags) PsdExposure (class in psdtags) PsdFilterMask (class in psdtags) PsdFormat (class in psdtags) psdformat (psdtags.PsdUnknown attribute) (psdtags.TiffImageResources attribute) (psdtags.TiffImageSourceData attribute) PsdImageMode (class in psdtags) PsdInteger (class in psdtags) PsdKey (class in psdtags) PsdKeyABC (class in psdtags) PsdLayer (class in psdtags) PsdLayerFlag (class in psdtags) PsdLayerMask (class in psdtags) PsdLayerMaskFlag (class in psdtags) PsdLayerMaskParameterFlag (class in psdtags) PsdLayers (class in psdtags) PsdMetadataSetting (class in psdtags) PsdMetadataSettings (class in psdtags) PsdPascalString (class in psdtags) PsdPascalStringBlock (class in psdtags) PsdPascalStringsBlock (class in psdtags) PsdPatterns (class in psdtags) PsdPoint (class in psdtags) PsdRectangle (class in psdtags) PsdReferencePoint (class in psdtags) PsdResourceBlockABC (class in psdtags) PsdResourceId (class in psdtags) PsdSectionDividerSetting (class in psdtags) PsdSectionDividerType (class in psdtags) PsdSheetColorSetting (class in psdtags) PsdString (class in psdtags) PsdStringBlock (class in psdtags) PsdStringsBlock (class in psdtags) psdtags.__version__ (in module psdtags) psdtags.REPR_MAXLEN (in module psdtags) PsdTextEngineData (class in psdtags) PsdThumbnailBlock (class in psdtags) PsdUnicodeString (class in psdtags) PsdUnknown (class in psdtags) PsdUserMask (class in psdtags) PsdVersionBlock (class in psdtags) PsdVirtualMemoryArray (class in psdtags) PsdVirtualMemoryArrayList (class in psdtags) PsdWord (class in psdtags) Ptu (class in ptufile.numcodecs) PTU (ptufile.PqFileType attribute) PtuFile (class in ptufile) ptufile.__version__ (in module ptufile) ptufile.FILE_EXTENSIONS (in module ptufile) PtuHwFeatures (class in ptufile) PtuMeasurementMode (class in ptufile) PtuMeasurementSubMode (class in ptufile) PtuMeasurementWarnings (class in ptufile) PtuRecordType (class in ptufile) PtuScanDirection (class in ptufile) PtuScannerType (class in ptufile) PtuStopReason (class in ptufile) PtuWriter (class in ptufile)

Q

qpi_metadata (tifffile.TiffFile property)

QUEUE_OVERRUN (ptufile.PtuStopReason attribute) QUICK_MASK_INFO (psdtags.PsdResourceId attribute)

R

range (molmass.Spectrum property) RATIONAL (tifffile.DATATYPE attribute) rational() (in module tifffile) ravel_multi_index() (liffile.LifImageFrames method) RAW (psdtags.PsdCompressionType attribute) rawdata (psdtags.PsdThumbnailBlock attribute) RawPal (class in lfdfiles) read() (liffile.LifMemoryBlock method) (psdtags.PsdBoolean class method) (psdtags.PsdBytesBlock class method) (psdtags.PsdChannel class method) (psdtags.PsdColorBlock class method) (psdtags.PsdEmpty class method) (psdtags.PsdExposure class method) (psdtags.PsdFilterMask class method) (psdtags.PsdFormat method) (psdtags.PsdInteger class method) (psdtags.PsdKeyABC class method) (psdtags.PsdLayer class method) (psdtags.PsdLayerMask class method) (psdtags.PsdLayers class method) (psdtags.PsdMetadataSetting class method) (psdtags.PsdMetadataSettings class method) (psdtags.PsdPascalString class method) (psdtags.PsdPascalStringBlock class method) (psdtags.PsdPascalStringsBlock class method) (psdtags.PsdPatterns class method) (psdtags.PsdReferencePoint class method) (psdtags.PsdResourceBlockABC class method) (psdtags.PsdSectionDividerSetting class method) (psdtags.PsdSheetColorSetting class method) (psdtags.PsdString class method) (psdtags.PsdStringBlock class method) (psdtags.PsdStringsBlock class method) (psdtags.PsdTextEngineData class method) (psdtags.PsdThumbnailBlock class method) (psdtags.PsdUnicodeString class method) (psdtags.PsdUnknown class method) (psdtags.PsdUserMask class method) (psdtags.PsdVersionBlock class method) (psdtags.PsdVirtualMemoryArray class method) (psdtags.PsdVirtualMemoryArrayList class method) (psdtags.PsdWord class method) (psdtags.TiffImageResources class method) (psdtags.TiffImageSourceData class method) (tifffile.FileCache method) (tifffile.FileHandle method) read_array() (liffile.LifMemoryBlock method) (tifffile.FileHandle method) read_content (czifile.CziContentFileType attribute) read_dimension_entries() (czifile.CziDirectoryEntryDV method) read_file_position() (czifile.CziAttachmentEntryA1 static method) (czifile.CziDirectoryEntryDV static method) read_gdal_structural_metadata() (in module tifffile) read_image() (psdtags.PsdChannel method) read_micromanager_metadata() (in module tifffile) read_ndtiff_index() (in module tifffile) read_psdblocks() (in module psdtags) read_psdtags() (in module psdtags) read_record() (tifffile.FileHandle method) read_records() (ptufile.PtuFile method) read_scanimage_metadata() (in module tifffile) read_segment_data (czifile.CziSegmentId attribute) read_segment_data() (czifile.CziAttachmentEntryA1 method) (czifile.CziDirectoryEntryDV method) read_segments() (tifffile.FileHandle method)

read_size() (psdtags.PsdFormat method) read_tifftag() (in module psdtags) reader_name (psdtags.PsdVersionBlock attribute) readinto() (liffile.LifMemoryBlock method) (tifffile.FileHandle method) REAL_USER_LAYER_MASK (psdtags.PsdChannelId attribute) record_offset (ptufile.PtuFile property) record_type (ptufile.PtuFile property) records (lfdfiles.FlimfastFlif attribute) RECT (roifile.ROI_TYPE attribute) rectangle (psdtags.PsdLayer attribute) (psdtags.PsdVirtualMemoryArrayList attribute) RED (psdtags.PsdColorType attribute) REDUCEDIMAGE (tifffile.FILETYPE attribute) (tifffile.OFILETYPE attribute) REF_CLK_LOST (ptufile.PtuStopReason attribute) reference (oirfile.OirFile property) REFERENCE_POINT (psdtags.PsdKey attribute) refine_settings() (fbdfile.FbdFile method) register_codec() (in module ptufile.numcodecs) (in module tifffile.numcodecs) (in module tifffile.zarr) RELATIVE (psdtags.PsdLayerMaskFlag attribute) RENDERED (psdtags.PsdLayerMaskFlag attribute) repeat_nd() (in module tifffile) reshape_axes() (in module tifffile) reshape_nd() (in module tifffile) resolution (tifffile.TiffFrame property) (tifffile.TiffPage property) RESOLUTION_INFO (psdtags.PsdResourceId attribute) resolutionunit (tifffile.TiffFrame property) (tifffile.TiffPage property) resourceid (psdtags.PsdBytesBlock attribute) (psdtags.PsdColorBlock attribute) (psdtags.PsdPascalStringBlock attribute) (psdtags.PsdPascalStringsBlock attribute) (psdtags.PsdResourceBlockABC attribute) (psdtags.PsdStringBlock attribute) (psdtags.PsdStringsBlock attribute) (psdtags.PsdThumbnailBlock attribute) (psdtags.PsdVersionBlock attribute) response() (in module dnacurve.web) (in module molmass.web) RESUNIT (class in tifffile) RGB (psdtags.PsdColorSpaceType attribute) (psdtags.PsdImageMode attribute) (tifffile.PHOTOMETRIC attribute) RGBFloat (psdtags.PsdColorSpaceType attribute) RIGHTBOT (tifffile.ORIENTATION attribute) RIGHTTOP (tifffile.ORIENTATION attribute) rise (dnacurve.Model attribute) RLE (psdtags.PsdCompressionType attribute) ROI_OPTIONS (class in roifile) ROI_POINT_SIZE (class in roifile) ROI_POINT_TYPE (class in roifile) ROI_SUBTYPE (class in roifile) ROI_TYPE (class in roifile) roifile.__version__ (in module roifile) roifile.ROI_COLOR_NONE (in module roifile) roiread() (in module roifile) roitype (roifile.ImagejRoi attribute) roiwrite() (in module roifile) roll (dnacurve.Model attribute) root (tifffile.TiffFile property) ROTATED_RECT (roifile.ROI_SUBTYPE attribute) ROTATION (czifile.CziDimensionType attribute)

S

SAMPLE_DTYPES (tifffile._TIFF property) SAMPLEFORMAT (class in tifffile) samples (czifile.CziPixelType attribute) (tifffile.StoredShape property) SAMSUNG_SRW (tifffile.COMPRESSION attribute) SAMSUNG_SRW2 (tifffile.COMPRESSION attribute) SATURATION (psdtags.PsdBlendMode attribute) save() (czifile.CziAttachmentSegmentData method) save_attachments() (czifile.CziFile method) saveas_oif() (oiffile.OibFileSystem method) SAVING_MERGED_TRANSPARENCY (psdtags.PsdKey attribute) SAVING_MERGED_TRANSPARENCY2 (psdtags.PsdKey attribute) SAVING_MERGED_TRANSPARENCY_16 (psdtags.PsdKey attribute) SAVING_MERGED_TRANSPARENCY_32 (psdtags.PsdKey attribute) SBYTE (tifffile.DATATYPE attribute) scale (czifile.CziDirectoryEntryDV property) (netpbmfile.NetpbmFile attribute) SCALE_LABELS (roifile.ROI_OPTIONS attribute) SCALE_STROKE_WIDTH (roifile.ROI_OPTIONS attribute) scales (dnacurve.CurvedDNA attribute) SCANBOX (ptufile.PtuScannerType attribute) scanimage_metadata (tifffile.TiffFile property) scanner (fbdfile.FbdFile attribute) (ptufile.PtuFile property) scanner_frame_start (fbdfile.FbdFile attribute) scanner_line_add (fbdfile.FbdFile property) scanner_line_length (fbdfile.FbdFile attribute) scanner_line_start (fbdfile.FbdFile attribute) SCENE (czifile.CziDimensionType attribute) scene_indices (czifile.CziImage property) scenes (czifile.CziFile property) schema_type (czifile.CziAttachmentEntryA1 property) (czifile.CziDimensionEntryDV1 property) (czifile.CziDirectoryEntryDV property) scn_metadata (tifffile.TiffFile property) SCREEN (psdtags.PsdBlendMode attribute) SdtFile (class in sdtfile) sdtfile.__version__ (in module sdtfile) sec_size (oiffile.CompoundFile attribute) SECTION_DIVIDER_SETTING (psdtags.PsdKey attribute) seek() (tifffile.FileHandle method) seekable() (tifffile.FileHandle method) segment (czifile.CziAttachmentDirectorySegmentData property) (czifile.CziAttachmentSegmentData property) (czifile.CziDeletedSegmentData property) (czifile.CziFileHeaderSegmentData property) (czifile.CziMetadataSegmentData property) (czifile.CziSegmentData property) (czifile.CziSubBlockDirectorySegmentData property) (czifile.CziSubBlockSegmentData property) (czifile.CziUnknownSegmentData property) segments() (czifile.CziFile method) (tifffile.TiffPage method) SELECTIVE_COLOR (psdtags.PsdKey attribute) sem_metadata (tifffile.TiffFile property) SEMANTIC_MASK (tifffile.PHOTOMETRIC attribute) SEPARATE (tifffile.PLANARCONFIG attribute) SEPARATED (tifffile.PHOTOMETRIC attribute) SEQ (ptufile.PhuMeasurementSubMode attribute) Sequence (class in dnacurve) series (molmass.Element attribute) (molmass.elements.Element attribute) (oiffile.OifFile property) SERIES (tifffile._TIFF property) series (tifffile.TiffFile property) set() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrStore method) (tifffile.zarr.ZarrTiffStore method) set_keyframe() (tifffile.TiffPages method) set_lock() (czifile.CziFile method) (fbdfile.FbdFile method) (liffile.LifFile method) (obffile.ObfFile method) (oirfile.OirFile method) (ptufile.PhuFile method) (ptufile.PqFile method) (ptufile.PtuFile method) (sdtfile.SdtFile method) (tifffile.FileHandle method) settings (oiffile.FileSystemAbc attribute) (oiffile.OibFileSystem attribute) (oiffile.OifFileSystem attribute) SettingsFile (class in oiffile) setup (sdtfile.SdtFile attribute) SetupBlock (class in sdtfile) sflim_decode() (in module fbdfile) SGILOG (tifffile.COMPRESSION attribute) SGILOG24 (tifffile.COMPRESSION attribute) shape (czifile.CziImage property) (lfdfiles.BioradPic attribute) (lfdfiles.Ccp4Map attribute) (lfdfiles.FlieOut attribute) (lfdfiles.FliezDb2 attribute) (lfdfiles.FliezI16 attribute) (lfdfiles.FlimageBin attribute) (lfdfiles.FlimfastFlif attribute) (lfdfiles.GlobalsAscii attribute) (lfdfiles.GlobalsLif attribute) (lfdfiles.LfdFile attribute) (lfdfiles.LfdFileSequence attribute) (lfdfiles.RawPal attribute) (lfdfiles.SimfcsB64 attribute) (lfdfiles.SimfcsBh attribute) (lfdfiles.SimfcsBhz attribute) (lfdfiles.SimfcsBin attribute) (lfdfiles.SimfcsCyl attribute) (lfdfiles.SimfcsFit attribute) (lfdfiles.SimfcsGpSeries attribute) (lfdfiles.SimfcsI64 attribute) (lfdfiles.SimfcsInt attribute) (lfdfiles.SimfcsIntPhsMod attribute) (lfdfiles.SimfcsJrn attribute) (lfdfiles.SimfcsR64 attribute) (lfdfiles.SimfcsRef attribute) (lfdfiles.SimfcsVpl attribute) (lfdfiles.SimfcsVpp attribute) (lfdfiles.SimfcsZ64 attribute) (lfdfiles.Vaa3dRaw attribute) (lfdfiles.VistaIfi attribute) (lfdfiles.VistaIfli attribute) (lfdfiles.VistaTdflim attribute) (lfdfiles.VoxxMap attribute) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (netpbmfile.NetpbmFile property) (obffile.ObfStack property) (oiffile.OifFile property) (oirfile.OirFile property) (oirfile.OirReference property) (psdtags.PsdLayer property) (psdtags.PsdLayerMask property) (psdtags.PsdLayers property) (psdtags.PsdRectangle property) (psdtags.PsdVirtualMemoryArray property) (ptufile.PtuFile property) (tifffile.FileSequence attribute) (tifffile.StoredShape property) (tifffile.TiffFrame property) (tifffile.TiffPage attribute) (tifffile.TiffPageSeries property) (tifffile.TiffSequence attribute) shaped (tifffile.TiffFrame property) (tifffile.TiffPage attribute) shaped_description (tifffile.TiffPage property) shaped_metadata (tifffile.TiffFile property) SHEET_COLOR_SETTING (psdtags.PsdKey attribute) SHEET_DISCLOSURE (psdtags.PsdResourceId attribute) SHORT (tifffile.DATATYPE attribute) short_sec_size (oiffile.CompoundFile attribute) show() (lfdfiles.BioradPic method) (lfdfiles.Ccp4Map method) (lfdfiles.FlieOut method) (lfdfiles.FliezDb2 method) (lfdfiles.FliezI16 method) (lfdfiles.FlimageBin method) (lfdfiles.FlimfastFlif method) (lfdfiles.GlobalsAscii method) (lfdfiles.GlobalsLif method) (lfdfiles.LfdFile method) (lfdfiles.RawPal method) (lfdfiles.SimfcsB64 method) (lfdfiles.SimfcsBh method) (lfdfiles.SimfcsBhz method) (lfdfiles.SimfcsBin method) (lfdfiles.SimfcsCyl method) (lfdfiles.SimfcsFit method) (lfdfiles.SimfcsI64 method) (lfdfiles.SimfcsInt method) (lfdfiles.SimfcsIntPhsMod method) (lfdfiles.SimfcsJrn method) (lfdfiles.SimfcsR64 method) (lfdfiles.SimfcsRef method) (lfdfiles.SimfcsVpl method) (lfdfiles.SimfcsVpp method) (lfdfiles.SimfcsZ64 method) (lfdfiles.Vaa3dRaw method) (lfdfiles.VistaIfi method) (lfdfiles.VistaIfli method) (lfdfiles.VistaTdflim method) (lfdfiles.VoxxMap method)

SHOW_LABELS (roifile.ROI_OPTIONS attribute) SID (czifile.CziSegmentData attribute) signature (psdtags.PsdMetadataSetting attribute) SimfcsB64 (class in lfdfiles) simfcsb64_write() (in module lfdfiles) SimfcsBh (class in lfdfiles) SimfcsBhz (class in lfdfiles) SimfcsBin (class in lfdfiles) SimfcsCyl (class in lfdfiles) SimfcsFit (class in lfdfiles) SimfcsGpSeries (class in lfdfiles) SimfcsI64 (class in lfdfiles) simfcsi64_write() (in module lfdfiles) SimfcsInt (class in lfdfiles) SimfcsIntPhsMod (class in lfdfiles) SimfcsJrn (class in lfdfiles) SimfcsR64 (class in lfdfiles) simfcsr64_write() (in module lfdfiles) SimfcsRaw (in module lfdfiles) SimfcsRef (class in lfdfiles) SimfcsVpl (class in lfdfiles) SimfcsVpp (class in lfdfiles) SimfcsZ64 (class in lfdfiles) simfcsz64_write() (in module lfdfiles) SINGLE_SUBBLOCK (czifile.CziPyramidType attribute) sis_metadata (tifffile.TiffFile property) size (czifile.CziDirectoryEntryDV property) (czifile.CziImage property) (lfdfiles.BioradPic property) (lfdfiles.Ccp4Map property) (lfdfiles.FlieOut property) (lfdfiles.FliezDb2 property) (lfdfiles.FliezI16 property) (lfdfiles.FlimageBin property) (lfdfiles.FlimfastFlif property) (lfdfiles.GlobalsAscii property) (lfdfiles.GlobalsLif property) (lfdfiles.LfdFile property) (lfdfiles.RawPal property) (lfdfiles.SimfcsB64 property) (lfdfiles.SimfcsBh property) (lfdfiles.SimfcsBhz property) (lfdfiles.SimfcsBin property) (lfdfiles.SimfcsCyl property) (lfdfiles.SimfcsFit property) (lfdfiles.SimfcsI64 property) (lfdfiles.SimfcsInt property) (lfdfiles.SimfcsIntPhsMod property) (lfdfiles.SimfcsJrn property) (lfdfiles.SimfcsR64 property) (lfdfiles.SimfcsRef property) (lfdfiles.SimfcsVpl property) (lfdfiles.SimfcsVpp property) (lfdfiles.SimfcsZ64 property) (lfdfiles.Vaa3dRaw property) (lfdfiles.VistaIfi property) (lfdfiles.VistaIfli property) (lfdfiles.VistaTdflim property) (lfdfiles.VoxxMap property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PtuFile property) (tifffile.FileHandle property) (tifffile.StoredShape property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) sizeformat (psdtags.PsdFormat property) sizes (czifile.CziImage property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) (liffile.LifImageFrames property) (obffile.ObfStack property) (oirfile.OirFile property) (oirfile.OirReference property) (ptufile.PtuFile property) (tifffile.TiffFrame property) (tifffile.TiffPage property) (tifffile.TiffPageSeries property) skew_matrix (lfdfiles.Ccp4Map attribute) skew_translation (lfdfiles.Ccp4Map attribute) SLICES (psdtags.PsdResourceId attribute) slices() (tifffile.TiledSequence method) SLONG (tifffile.DATATYPE attribute) SLONG8 (tifffile.DATATYPE attribute) SMALL (roifile.ROI_POINT_SIZE attribute) SMART_OBJECT_LAYER_DATA (psdtags.PsdKey attribute) SMART_OBJECT_LAYER_DATA_CC15 (psdtags.PsdKey attribute) SOFT_LIGHT (psdtags.PsdBlendMode attribute) SOLID_COLOR_SHEET_SETTING (psdtags.PsdKey attribute) SONY_ARW (tifffile.COMPRESSION attribute) spacegoup (lfdfiles.Ccp4Map attribute) spacing (lfdfiles.BioradPic attribute) spc_bin_hdr (sdtfile.SetupBlock attribute) spc_bin_hdr_ext (sdtfile.SetupBlock property) Spectrum (class in molmass) spectrum() (molmass.Formula method) SpectrumEntry (class in molmass) SPLINE_FIT (roifile.ROI_OPTIONS attribute) split_charge() (in module molmass) SPOT_HALFTONE (psdtags.PsdResourceId attribute) SPQR (ptufile.PqFileType attribute) squeezed (tifffile.StoredShape property) SRATIONAL (tifffile.DATATYPE attribute) SSHORT (tifffile.DATATYPE attribute) stacks (obffile.ObfFile property) start (czifile.CziImage property) (lfdfiles.Ccp4Map attribute) start() (tifffile.Timer method) start_coordinate (czifile.CziDirectoryEntryDV property) stk_metadata (tifffile.TiffFile property) stop() (tifffile.Timer method) stop_reason (ptufile.PtuFile property) storage_size (czifile.CziDirectoryEntryDV property) StoredShape (class in tifffile) storedsize (czifile.CziImage property) streak_metadata (tifffile.TiffFile property) STRILE (tifffile.CHUNKMODE attribute) string (dnacurve.Sequence property) strptime() (in module tifffile) SUB_PIXEL_RESOLUTION (roifile.ROI_OPTIONS attribute) subblock_directory (czifile.CziFile property) subblock_entry_offset (czifile.CziDirectoryEntryDV property) subblocks() (czifile.CziFile method) subpixelrect (roifile.ImagejRoi property) subpixelresolution (roifile.ImagejRoi property) SUBTRACT (psdtags.PsdBlendMode attribute) subtype (roifile.ImagejRoi attribute) superimpose_matrix() (in module dnacurve) supports_deletes (tifffile.zarr.ZarrFileSequenceStore property) (tifffile.zarr.ZarrStore property) (tifffile.zarr.ZarrTiffStore property) supports_listing (tifffile.zarr.ZarrFileSequenceStore property) (tifffile.zarr.ZarrStore property) (tifffile.zarr.ZarrTiffStore property) supports_writes (tifffile.zarr.ZarrFileSequenceStore property) (tifffile.zarr.ZarrStore property) (tifffile.zarr.ZarrTiffStore property) SUSPENDED (ptufile.PtuStopReason attribute) symbol (molmass.CompositionItem attribute) (molmass.Element attribute) (molmass.elements.Element attribute) symboltable (lfdfiles.Ccp4Map attribute) SYNC_LOST (ptufile.PtuStopReason attribute) SYNC_RATE_TOO_HIGH (ptufile.PtuMeasurementWarnings attribute) SYNC_RATE_TOO_LOW (ptufile.PtuMeasurementWarnings attribute) SYNC_RATE_ZERO (ptufile.PtuMeasurementWarnings attribute) syncrate (ptufile.PtuFile property) synthesizer (fbdfile.FbdFile attribute) SYS_ERROR (ptufile.PtuStopReason attribute) SYSTEMRAW (czifile.CziCompressionType attribute)

T

T2 (ptufile.PtuMeasurementMode attribute) T2_RECORD_DTYPE (in module ptufile) T3 (ptufile.PtuMeasurementMode attribute) T3_RECORD_DTYPE (in module ptufile) TAG_ATTRIBUTES (tifffile._TIFF property) TAG_ENUM (tifffile._TIFF property) TAG_FILTERED (tifffile._TIFF property) TAG_LOAD (tifffile._TIFF property) TAG_READERS (tifffile._TIFF property) TAG_TUPLE (tifffile._TIFF property) tags (ptufile.PhuFile attribute) (ptufile.PqFile attribute) (ptufile.PtuFile attribute) TAGS (tifffile._TIFF property) tags (tifffile.TiffPage attribute) tboil (molmass.Element attribute) (molmass.elements.Element attribute) TCSPC_ERROR (ptufile.PtuStopReason attribute) tcspc_resolution (liffile.LifFlimImage property) (ptufile.PhuFile property) (ptufile.PtuFile property) tell() (tifffile.FileHandle method) TEXT (roifile.ROI_SUBTYPE attribute) TEXT_ENGINE_DATA (psdtags.PsdKey attribute) THRESHOLD (psdtags.PsdKey attribute) thumbnail (oirfile.OirFile property) thumbnail() (psdtags.TiffImageResources method) THUMBNAIL_RESOURCE (psdtags.PsdResourceId attribute) THUMBNAIL_RESOURCE_PS4 (psdtags.PsdResourceId attribute) THUNDERSCAN (tifffile.COMPRESSION attribute) TIF (liffile.LifMemoryBlockType attribute) Tiff (class in tifffile.numcodecs) (class in tifffile.zarr) TIFF (in module tifffile) tiff (tifffile.TiffFile attribute) (tifffile.TiffWriter attribute) TiffFile (class in tifffile) tifffile.__version__ (in module tifffile) TiffFileError (class in tifffile) TiffFormat (class in tifffile) TiffFrame (class in tifffile) TiffImageResources (class in psdtags) TiffImageSourceData (class in psdtags) TiffPage (class in tifffile) TiffPages (class in tifffile) TiffPageSeries (class in tifffile) TiffReader (in module tifffile) TiffSequence (class in tifffile) TiffSeries (class in tifffile) TiffTag (class in tifffile) tifftag() (psdtags.TiffImageResources method) (psdtags.TiffImageSourceData method) TiffTagRegistry (class in tifffile) TiffTags (class in tifffile) TiffWriter (class in tifffile) tile (tifffile.TiffFrame property) (tifffile.TiffPage property) TiledSequence (class in tifffile) tilescan (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) tilt (dnacurve.Model attribute) TIME (czifile.CziDimensionType attribute) TIME_OVER (ptufile.PtuStopReason attribute) TIME_SPAN_TOO_SMALL (ptufile.PtuMeasurementWarnings attribute) TimeHarp260NT2 (ptufile.PtuRecordType attribute) TimeHarp260NT3 (ptufile.PtuRecordType attribute) TimeHarp260PT2 (ptufile.PtuRecordType attribute) TimeHarp260PT3 (ptufile.PtuRecordType attribute) TIMELINE_INFO (psdtags.PsdResourceId attribute) Timer (class in tifffile) TIMER_CHANGE (czifile.CziEventType attribute) times (sdtfile.SdtFile attribute) timestamps (czifile.CziFile property) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property) TINY (roifile.ROI_POINT_SIZE attribute) title (psdtags.PsdLayer property) (psdtags.PsdThumbnailBlock property) tmelt (molmass.Element attribute) (molmass.elements.Element attribute) to_dict() (tifffile.zarr.Tiff method) tobytes() (psdtags.PsdBlendMode method) (psdtags.PsdBoolean method) (psdtags.PsdBytesBlock method) (psdtags.PsdChannel method) (psdtags.PsdColorBlock method) (psdtags.PsdEmpty method) (psdtags.PsdExposure method) (psdtags.PsdFilterMask method) (psdtags.PsdInteger method) (psdtags.PsdKey method) (psdtags.PsdKeyABC method) (psdtags.PsdLayer method) (psdtags.PsdLayerMask method) (psdtags.PsdLayers method) (psdtags.PsdMetadataSettings method) (psdtags.PsdPascalStringBlock method) (psdtags.PsdPascalStringsBlock method) (psdtags.PsdPatterns method) (psdtags.PsdReferencePoint method) (psdtags.PsdResourceBlockABC method) (psdtags.PsdSectionDividerSetting method) (psdtags.PsdSheetColorSetting method) (psdtags.PsdString method) (psdtags.PsdStringBlock method) (psdtags.PsdStringsBlock method) (psdtags.PsdTextEngineData method) (psdtags.PsdThumbnailBlock method) (psdtags.PsdUnknown method) (psdtags.PsdUserMask method) (psdtags.PsdVersionBlock method) (psdtags.PsdWord method) (psdtags.TiffImageResources method) (psdtags.TiffImageSourceData method) (roifile.ImagejRoi method)

tofile() (roifile.ImagejRoi method) TOPLEFT (tifffile.ORIENTATION attribute) TOPRIGHT (tifffile.ORIENTATION attribute) tostring() (tifffile.OmeXml method) total (molmass.Composition property) TotalInk (psdtags.PsdColorSpaceType attribute) totiff() (lfdfiles.BioradPic method) (lfdfiles.Ccp4Map method) (lfdfiles.FlieOut method) (lfdfiles.FliezDb2 method) (lfdfiles.FliezI16 method) (lfdfiles.FlimageBin method) (lfdfiles.FlimfastFlif method) (lfdfiles.GlobalsAscii method) (lfdfiles.GlobalsLif method) (lfdfiles.LfdFile method) (lfdfiles.RawPal method) (lfdfiles.SimfcsB64 method) (lfdfiles.SimfcsBh method) (lfdfiles.SimfcsBhz method) (lfdfiles.SimfcsBin method) (lfdfiles.SimfcsCyl method) (lfdfiles.SimfcsFit method) (lfdfiles.SimfcsI64 method) (lfdfiles.SimfcsInt method) (lfdfiles.SimfcsIntPhsMod method) (lfdfiles.SimfcsJrn method) (lfdfiles.SimfcsR64 method) (lfdfiles.SimfcsRef method) (lfdfiles.SimfcsVpl method) (lfdfiles.SimfcsVpp method) (lfdfiles.SimfcsZ64 method) (lfdfiles.Vaa3dRaw method) (lfdfiles.VistaIfi method) (lfdfiles.VistaIfli method) (lfdfiles.VistaTdflim method) (lfdfiles.VoxxMap method) Toyo (psdtags.PsdColorSpaceType attribute) TRACED (roifile.ROI_TYPE attribute) transferfunction (tifffile.TiffPage property) transform (tifffile.TiffPageSeries attribute) TRANSPARENCY_INDEX (psdtags.PsdResourceId attribute) TRANSPARENCY_MASK (psdtags.PsdChannelId attribute) TRANSPARENCY_PROTECTED (psdtags.PsdLayerFlag attribute) TRANSPARENCY_SHAPES_LAYER (psdtags.PsdKey attribute) transpose_axes() (in module tifffile) treeindex (tifffile.TiffFrame property) (tifffile.TiffPage property) TRES (ptufile.PhuMeasurementSubMode attribute) TRIG_OUT (ptufile.PtuHwFeatures attribute) TRIGGER (czifile.CziEventType attribute) Trumatch (psdtags.PsdColorSpaceType attribute) TTTR (ptufile.PtuHwFeatures attribute) tupltype (netpbmfile.NetpbmFile attribute) TVIPS_HEADER_V1 (tifffile._TIFF property) TVIPS_HEADER_V2 (tifffile._TIFF property) tvips_metadata (tifffile.TiffFile property) twist (dnacurve.Model attribute) type (liffile.LifFile attribute) (ptufile.PhuFile attribute) (ptufile.PqFile attribute) (ptufile.PtuFile attribute) TYPE_TOOL_INFO (psdtags.PsdKey attribute) TYPE_TOOL_OBJECT_SETTING (psdtags.PsdKey attribute)

U

UIC_TAGS (tifffile._TIFF property) UINT (tifffile.SAMPLEFORMAT attribute) UNASSALPHA (tifffile.EXTRASAMPLE attribute) UNCOMPRESSED (czifile.CziCompressionType attribute) UNDEFINED (roifile.ROI_SUBTYPE attribute) (tifffile.DATATYPE attribute) (tifffile.FILETYPE attribute) (tifffile.OFILETYPE attribute) UNICODE (tifffile.DATATYPE attribute) UNICODE_LAYER_NAME (psdtags.PsdKey attribute) UNICODE_PATH_NAME (psdtags.PsdKey attribute) unique_oligos() (in module dnacurve) units_per_sample (fbdfile.FbdFile property) UNKNOWN (czifile.CziCompressionType attribute) (czifile.CziContentFileType attribute) (czifile.CziDimensionType attribute) (czifile.CziEventType attribute) (czifile.CziPixelType attribute) (czifile.CziPyramidType attribute) (czifile.CziSegmentId attribute) (liffile.LifMemoryBlockType attribute) (psdtags.PsdBlendMode attribute) (psdtags.PsdColorSpaceType attribute) (psdtags.PsdColorType attribute) (psdtags.PsdCompressionType attribute) (psdtags.PsdImageMode attribute) (psdtags.PsdKey attribute) (psdtags.PsdResourceId attribute) (psdtags.PsdSectionDividerType attribute) (ptufile.PhuMeasurementMode attribute) (ptufile.PhuMeasurementSubMode attribute) (ptufile.PtuMeasurementMode attribute) (ptufile.PtuMeasurementSubMode attribute) (ptufile.PtuScannerType attribute) (ptufile.PtuStopReason attribute) (roifile.ROI_POINT_SIZE attribute) (roifile.ROI_POINT_TYPE attribute) (roifile.ROI_SUBTYPE attribute) (roifile.ROI_TYPE attribute)

UNKNOWN_14 (roifile.ROI_OPTIONS attribute) UNKNOWN_15 (roifile.ROI_OPTIONS attribute) UNPREDICTORS (tifffile._TIFF property) unravel_index() (liffile.LifImageFrames method) UNSPECIFIED (tifffile.EXTRASAMPLE attribute) update() (tifffile.TiffTagRegistry method) update_kwargs() (in module tifffile) URL (psdtags.PsdResourceId attribute) URL_LIST (psdtags.PsdResourceId attribute) use_xarray (ptufile.PtuFile property) useframes (tifffile.TiffPages property) USER_DENSITY (psdtags.PsdLayerMaskParameterFlag attribute) USER_FEATHER (psdtags.PsdLayerMaskParameterFlag attribute) USER_LAYER_MASK (psdtags.PsdChannelId attribute) USER_MASK (psdtags.PsdKey attribute) usermask (psdtags.TiffImageSourceData attribute) USING_ALIGNED_RENDERING (psdtags.PsdKey attribute) utf16 (psdtags.PsdFormat property) (roifile.ImagejRoi property) uuid (liffile.LifFile attribute) (liffile.LifFlimImage property) (liffile.LifImage property) (liffile.LifImageABC property)

V

Vaa3dRaw (class in lfdfiles) vaa3draw_write() (in module lfdfiles) validate() (molmass.Element method) (molmass.elements.Element method) (tifffile.OmeXml static method) validate_jhove() (in module tifffile) value (psdtags.PsdBlendMode attribute) (psdtags.PsdBoolean attribute) (psdtags.PsdBytesBlock attribute) (psdtags.PsdInteger attribute) (psdtags.PsdKey attribute) (psdtags.PsdPascalString attribute) (psdtags.PsdPascalStringBlock attribute) (psdtags.PsdString attribute) (psdtags.PsdStringBlock attribute) (psdtags.PsdUnicodeString attribute) (psdtags.PsdUnknown attribute) (psdtags.PsdWord attribute) (tifffile.TiffTag property) valuebytecount (tifffile.TiffTag property) valueof() (tifffile.TiffTags method) values (psdtags.PsdPascalStringsBlock attribute) (psdtags.PsdStringsBlock attribute) values() (liffile.LifImageFrames method) (molmass.Composition method) (molmass.Spectrum method) (tifffile.TiffTags method) vdwrad (molmass.Element attribute) (molmass.elements.Element attribute)

VECTOR_DENSITY (psdtags.PsdLayerMaskParameterFlag attribute) VECTOR_FEATHER (psdtags.PsdLayerMaskParameterFlag attribute) VECTOR_MASK_AS_GLOBAL_MASK (psdtags.PsdKey attribute) VECTOR_MASK_SETTING (psdtags.PsdKey attribute) VECTOR_MASK_SETTING_CS6 (psdtags.PsdKey attribute) VECTOR_ORIGINATION_DATA (psdtags.PsdKey attribute) VECTOR_STROKE_CONTENT_DATA (psdtags.PsdKey attribute) VECTOR_STROKE_DATA (psdtags.PsdKey attribute) version (liffile.LifFile attribute) (oiffile.FileSystemAbc attribute) (oiffile.OibFileSystem attribute) (oiffile.OifFileSystem attribute) (psdtags.PsdVersionBlock attribute) (ptufile.PhuFile attribute) (ptufile.PqFile attribute) (ptufile.PtuFile attribute) VERSION_INFO (psdtags.PsdResourceId attribute) version_major (oiffile.CompoundFile attribute) version_minor (oiffile.CompoundFile attribute) VIBRANCE (psdtags.PsdKey attribute) VIEW (czifile.CziDimensionType attribute) VIOLET (psdtags.PsdColorType attribute) VISIBLE (psdtags.PsdLayerFlag attribute) VistaIfi (class in lfdfiles) VistaIfli (class in lfdfiles) VistaTdflim (class in lfdfiles) VIVID_LIGHT (psdtags.PsdBlendMode attribute) VOID (tifffile.SAMPLEFORMAT attribute) VoxxMap (class in lfdfiles) voxxmap_write() (in module lfdfiles)

W

WATERMARK (psdtags.PsdResourceId attribute) Web (psdtags.PsdColorSpaceType attribute) WEBP (tifffile.COMPRESSION attribute) WEBP_DEPRECATED (tifffile.COMPRESSION attribute) WideCMYK (psdtags.PsdColorSpaceType attribute) WIDTH (czifile.CziDimensionType attribute) width (netpbmfile.NetpbmFile attribute) (psdtags.PsdThumbnailBlock attribute) windows (dnacurve.CurvedDNA attribute) (fbdfile.FbdFile attribute) WINDOWS_DEVMODE (psdtags.PsdResourceId attribute) WORKFLOW_URL (psdtags.PsdResourceId attribute) WORKING_PATH (psdtags.PsdResourceId attribute) writable (czifile.CziFile property) (fbdfile.FbdFile property) (liffile.LifFile property) (obffile.ObfFile property) (oirfile.OirFile property) (ptufile.PhuFile property) (ptufile.PqFile property) (ptufile.PtuFile property) (sdtfile.SdtFile property) writable() (tifffile.FileHandle method) write() (dnacurve.Model method) (dnacurve.Sequence method) (netpbmfile.NetpbmFile method) (psdtags.PsdBlendMode method) (psdtags.PsdBoolean method) (psdtags.PsdBytesBlock method) (psdtags.PsdChannel method) (psdtags.PsdColorBlock method) (psdtags.PsdEmpty method) (psdtags.PsdExposure method) (psdtags.PsdFilterMask method) (psdtags.PsdFormat method) (psdtags.PsdInteger method) (psdtags.PsdKey method) (psdtags.PsdKeyABC method) (psdtags.PsdLayer method) (psdtags.PsdLayerMask method) (psdtags.PsdLayers method) (psdtags.PsdMetadataSetting method) (psdtags.PsdMetadataSettings method) (psdtags.PsdPascalString method) (psdtags.PsdPascalStringBlock method) (psdtags.PsdPascalStringsBlock method) (psdtags.PsdPatterns method) (psdtags.PsdReferencePoint method) (psdtags.PsdResourceBlockABC method) (psdtags.PsdSectionDividerSetting method) (psdtags.PsdSheetColorSetting method) (psdtags.PsdString method) (psdtags.PsdStringBlock method) (psdtags.PsdStringsBlock method) (psdtags.PsdTextEngineData method) (psdtags.PsdThumbnailBlock method) (psdtags.PsdUnicodeString method) (psdtags.PsdUnknown method) (psdtags.PsdUserMask method) (psdtags.PsdVersionBlock method) (psdtags.PsdVirtualMemoryArray method) (psdtags.PsdVirtualMemoryArrayList method) (psdtags.PsdWord method) (psdtags.TiffImageResources method) (psdtags.TiffImageSourceData method) (ptufile.PtuWriter method) (tifffile.FileCache method) (tifffile.FileHandle method) (tifffile.TiffWriter method)

write_array() (tifffile.FileHandle method) write_csv() (dnacurve.CurvedDNA method) write_empty() (tifffile.FileHandle method) write_fsspec() (tifffile.zarr.ZarrFileSequenceStore method) (tifffile.zarr.ZarrTiffStore method) write_key() (psdtags.PsdFormat method) write_pdb() (dnacurve.CurvedDNA method) write_psdblocks() (in module psdtags) write_psdtags() (in module psdtags) write_signature() (psdtags.PsdFormat method) write_size() (psdtags.PsdFormat method) writer_name (psdtags.PsdVersionBlock attribute)

X

x (psdtags.PsdReferencePoint attribute) XLCF (liffile.LifFileType attribute) XLEF (liffile.LifFileType attribute) XLIF (liffile.LifFileType attribute) XLLF (liffile.LifFileType attribute) xml2dict() (in module liffile) (in module tifffile) xml_element (czifile.CziFile property) (liffile.LifFile attribute) (liffile.LifFlimImage attribute) (liffile.LifImage attribute) (liffile.LifImageABC attribute)

xml_header() (liffile.LifFile method) xml_metadata (oirfile.OirFile property) XMP_METADATA (psdtags.PsdResourceId attribute) XXL (roifile.ROI_POINT_SIZE attribute) XXXL (roifile.ROI_POINT_SIZE attribute) XY (ptufile.PtuScanDirection attribute) XZ (ptufile.PtuScanDirection attribute)

Y

y (psdtags.PsdReferencePoint attribute) YCBCR (tifffile.PHOTOMETRIC attribute)

YELLOW (psdtags.PsdColorType attribute) YZ (ptufile.PtuScanDirection attribute)

Z

ZarrFileSequenceStore (class in tifffile.zarr) ZarrStore (class in tifffile.zarr) ZarrTiffStore (class in tifffile.zarr) ZERO_TRANSPARENT (roifile.ROI_OPTIONS attribute) ZIP (czifile.CziContentFileType attribute) (psdtags.PsdCompressionType attribute) ZIP_COMP (czifile.CziContentFileType attribute) ZIP_PREDICTED (psdtags.PsdCompressionType attribute) ZISRAW (czifile.CziContentFileType attribute)

ZISRAWATTACH (czifile.CziSegmentId attribute) ZISRAWATTDIR (czifile.CziSegmentId attribute) ZISRAWDIRECTORY (czifile.CziSegmentId attribute) ZISRAWFILE (czifile.CziSegmentId attribute) ZISRAWMETADATA (czifile.CziSegmentId attribute) ZISRAWSUBBLOCK (czifile.CziSegmentId attribute) ZSTD (czifile.CziCompressionType attribute) (tifffile.COMPRESSION attribute) ZSTD_DEPRECATED (tifffile.COMPRESSION attribute) ZSTDHDR (czifile.CziCompressionType attribute)